Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021291
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2634|AAF49539.1|  890|Drosophila melanogaster CG5414-PA...    29   4.2  
AY071256-1|AAL48878.1|  521|Drosophila melanogaster RE29447p pro...    29   7.3  
AE014297-4743|AAF57149.2|  521|Drosophila melanogaster CG31002-P...    29   7.3  

>AE014296-2634|AAF49539.1|  890|Drosophila melanogaster CG5414-PA
           protein.
          Length = 890

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 468 LSYQVIKPLKDIILREQYIHLNFKNYLPARYPHDFKVRLNKQ*DAP 605
           + + V K LKDI LR++  H    NY+P    H   + L     AP
Sbjct: 74  MGHAVNKILKDITLRQRVAHGQRVNYIPGWDCHGLPIELKATSTAP 119


>AY071256-1|AAL48878.1|  521|Drosophila melanogaster RE29447p
           protein.
          Length = 521

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 25  VDLFCLFTVSSGLNVFKCVVYLYVMYIN-CLISVKVHKCEKMKQ 153
           +D+F  F V + L +   V YL VM +  CL  +K  KCE +K+
Sbjct: 477 LDVFGTFLVGA-LVILGIVTYLLVMTLRKCLFLIKRGKCEAIKK 519


>AE014297-4743|AAF57149.2|  521|Drosophila melanogaster CG31002-PA
           protein.
          Length = 521

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 25  VDLFCLFTVSSGLNVFKCVVYLYVMYIN-CLISVKVHKCEKMKQ 153
           +D+F  F V + L +   V YL VM +  CL  +K  KCE +K+
Sbjct: 477 LDVFGTFLVGA-LVILGIVTYLLVMTLRKCLFLIKRGKCEAIKK 519


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,700,927
Number of Sequences: 53049
Number of extensions: 503121
Number of successful extensions: 765
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)