Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021290
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   0.96 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           24   1.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.7  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +2

Query: 299 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGID 448
           GDP      +TL   D W++  + +  + I T +    F  +K    G+D
Sbjct: 21  GDPTERDLIVTLDDRDLWLR-FECLTNEMIVTKNGRRMFPVVKVTAAGLD 69


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 201 ENGNAPGASNGTSSKSEDTPYLSRKPSRRFP 293
           E   +P    G   KSED P +S K     P
Sbjct: 202 EQSLSPDTVFGDDGKSEDVPVISLKNENELP 232


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +2

Query: 314 DGKAITLSQSDKWMKQAKVIDGKKITTTDTAIH-FKKLKSVKLGIDDYQKFLDDLAKNKK 490
           D + + L+ S + ++Q K++   +       +  F++L   K   D Y+KF +  +KN K
Sbjct: 379 DSEDLPLNISREMLQQNKILKVIRKNLVKKCLELFEELAEDK---DGYKKFYEQFSKNIK 435

Query: 491 VELDE 505
           + + E
Sbjct: 436 LGIHE 440


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = -3

Query: 408 IAVSVVVIFFPSITLACFIHLSLCESVMAFPSDLGS--PNLENALKASLKDKAYPRFYWT 235
           I + +V++FF   +L CF +  +  +             NLE+  K   K K Y  +Y+ 
Sbjct: 61  IHIKIVLMFFKEASLYCFNYYVIVVTTFYKRRTWTRLLKNLESCAKIK-KTKRYCYYYYA 119

Query: 234 F 232
           F
Sbjct: 120 F 120


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 478 REII*KLLVVVDAEFYRFE 422
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 478 REII*KLLVVVDAEFYRFE 422
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 478 REII*KLLVVVDAEFYRFE 422
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 478 REII*KLLVVVDAEFYRFE 422
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 579 GRRSIDRHEQIY 614
           GR+ + +H+QIY
Sbjct: 23  GRKKLSKHQQIY 34


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 225 SNGTSSKSEDTPYLSRKPSRRFP 293
           SNG   + ED P +S   S R P
Sbjct: 900 SNGAKEEDEDKPSVSPLTSPRQP 922


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,807
Number of Sequences: 336
Number of extensions: 3145
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)