Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021290
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   1.6  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   2.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.4  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.5  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 404 AIHFKKLKSVKLGIDDYQKFLDDLAKNKKVE 496
           A HF+  KS K+ ++ Y K      K  K+E
Sbjct: 101 ATHFEANKSFKITVETYNKHFSQREKVAKIE 131


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 402 VSVVVIFFPSITLACFIHLSLCESVMAFPSDLGSPNLENALKASLKDKAYPRFYW 238
           + +V +F P I   CF   +   S +A  S + +P +  AL    KDK YP+  W
Sbjct: 491 MELVSVFGPLIYAGCFA--ATLSSALA--SLVSAPKVFQAL---CKDKLYPKISW 538


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 201  ENGNAPGASNGTSSKSEDT 257
            ++G+ PG+ N T ++S+DT
Sbjct: 1371 DSGDKPGSRNRTITQSQDT 1389


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 642 FIEALPVRTSIFARVCQSIYGRCGCR 565
           F+  +P   +  A +C S  GRC C+
Sbjct: 721 FMPCVPCDCNKHAEICDSETGRCICQ 746


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +3

Query: 186 KDVKLENGNAPGASNGTSSKSEDTPYLSRKPSRR---FPNLEIPSPMEKPS 329
           K + L NGN P       SK+ ++ YLS+  + R    P    P P   P+
Sbjct: 451 KSLLLLNGNGPPPPVPERSKTPNSIYLSQNGTPRSTPVPFALAPPPAASPA 501


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,483
Number of Sequences: 2352
Number of extensions: 13036
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)