Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021288
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 173 8e-44
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 173 8e-44
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 173 8e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 173 8e-44
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 103 9e-23
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 70 2e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 70 2e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 62 4e-10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 62 4e-10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 62 4e-10
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 0.002
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 37 0.012
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 36 0.038
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 35 0.050
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.15
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.26
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.26
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.35
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 1.1
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 1.1
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.5
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 9.9
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 173 bits (422), Expect = 8e-44
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 152 bits (368), Expect = 3e-37
Identities = 88/151 (58%), Positives = 96/151 (63%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TL
Sbjct: 84 KYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTL 143
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRFEKSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWS 613
GVKQL+ S P + P +SRR T Q L D TETTC
Sbjct: 144 GVKQLV-------SLRSP----------TRSPDSSRRSDTIQRLFHLSQSPDSTETTCLR 186
Query: 614 LQPKCLGSRDGRWSVRKAKLTENASLKLSMP 706
C GSRDG + RK L E S +L P
Sbjct: 187 SPRTCHGSRDGLLNARKETLPERPSSRLLTP 217
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 173 bits (422), Expect = 8e-44
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 111 bits (267), Expect = 5e-25
Identities = 51/71 (71%), Positives = 58/71 (81%)
Frame = +1
Query: 496 AQI*EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 675
A+ EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A
Sbjct: 131 ARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNAS 190
Query: 676 GKCLIEALDAI 708
GK L+EALD+I
Sbjct: 191 GKTLLEALDSI 201
Score = 72.5 bits (170), Expect(2) = 3e-18
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 355
+YY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 84 KYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 37.1 bits (82), Expect(2) = 3e-18
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 446 LIVGVNKMDSTEPPYSEPRF 505
L+V NKMDSTEPP+SE RF
Sbjct: 114 LVVACNKMDSTEPPFSEARF 133
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 173 bits (422), Expect = 8e-44
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 161 bits (391), Expect = 4e-40
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TL
Sbjct: 84 KYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTL 143
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRF 505
GVKQLIV NKMDSTEPP+SE RF
Sbjct: 144 GVKQLIVACNKMDSTEPPFSEARF 167
Score = 111 bits (267), Expect = 5e-25
Identities = 51/71 (71%), Positives = 58/71 (81%)
Frame = +1
Query: 496 AQI*EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 675
A+ EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A
Sbjct: 165 ARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNAS 224
Query: 676 GKCLIEALDAI 708
GK L+EALD+I
Sbjct: 225 GKTLLEALDSI 235
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 173 bits (422), Expect = 8e-44
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 161 bits (391), Expect = 4e-40
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TL
Sbjct: 84 KYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTL 143
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRF 505
GVKQLIV NKMDSTEPP+SE RF
Sbjct: 144 GVKQLIVACNKMDSTEPPFSEARF 167
Score = 111 bits (267), Expect = 5e-25
Identities = 51/71 (71%), Positives = 58/71 (81%)
Frame = +1
Query: 496 AQI*EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 675
A+ EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A
Sbjct: 165 ARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNAS 224
Query: 676 GKCLIEALDAI 708
GK L+EALD+I
Sbjct: 225 GKTLLEALDSI 235
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 186 DKLKAER 206
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 109 bits (261), Expect = 3e-24
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 442
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV
Sbjct: 250 IVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVT 309
Query: 443 QLIVGVNKMDSTEPPYSEPRFEK 511
QLIV VNK+D+ + +S+ RF++
Sbjct: 310 QLIVAVNKLDTVD--WSQDRFDE 330
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +3
Query: 15 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 194
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 195 KAERERGITIDIALWKFE 248
+ ERERG+T+DI FE
Sbjct: 227 EEERERGVTMDIGRTSFE 244
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 508 EIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC 684
EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ DG C
Sbjct: 330 EIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWY------------DGPC 374
Query: 685 LIEALDA 705
L+E +D+
Sbjct: 375 LLELIDS 381
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 109 bits (261), Expect = 3e-24
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 442
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV
Sbjct: 268 IVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVT 327
Query: 443 QLIVGVNKMDSTEPPYSEPRFEK 511
QLIV VNK+D+ + +S+ RF++
Sbjct: 328 QLIVAVNKLDTVD--WSQDRFDE 348
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +3
Query: 15 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 194
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 195 KAERERGITIDIALWKFE 248
+ ERERG+T+DI FE
Sbjct: 245 EEERERGVTMDIGRTSFE 262
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 508 EIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC 684
EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ DG C
Sbjct: 348 EIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWY------------DGPC 392
Query: 685 LIEALDA 705
L+E +D+
Sbjct: 393 LLELIDS 399
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 103 bits (248), Expect = 9e-23
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Frame = +2
Query: 260 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 439
+ TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GV
Sbjct: 188 HFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGV 247
Query: 440 KQLIVGVNKMDSTEPPYSEPRFEKSRRKYPHTSRRLA---TTQLLSLSCPFLDG 592
K L++ VNKMD + E RF++ K R+L T + + C L G
Sbjct: 248 KHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
Score = 87.8 bits (208), Expect = 7e-18
Identities = 38/80 (47%), Positives = 56/80 (70%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 189 KLKAERERGITIDIALWKFE 248
ERE+G T+++ FE
Sbjct: 164 TNDEEREKGKTVEVGRAYFE 183
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 275 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 454
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 455 GVNKMDSTE 481
+NK D E
Sbjct: 167 FINKADLVE 175
Score = 31.1 bits (67), Expect = 0.81
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 18 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 192 LKAERERGITIDIA 233
K E++RGITI++A
Sbjct: 86 GKEEKKRGITINVA 99
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 275 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 454
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 455 GVNKMDSTE 481
+NK D E
Sbjct: 167 FINKADLVE 175
Score = 31.1 bits (67), Expect = 0.81
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 18 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 192 LKAERERGITIDIA 233
K E++RGITI++A
Sbjct: 86 GKEEKKRGITINVA 99
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 62.1 bits (144), Expect = 4e-10
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +2
Query: 236 LEVRN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 415
LE + + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH
Sbjct: 105 LEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHL 157
Query: 416 LLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 502
LLA +GV ++V +NK+D E P +E R
Sbjct: 158 LLARQVGVPLDNIVVFMNKVD--EVPDAETR 186
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 182
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 183 LDKLKAER 206
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 62.1 bits (144), Expect = 4e-10
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +2
Query: 236 LEVRN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 415
LE + + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH
Sbjct: 106 LEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHL 158
Query: 416 LLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 502
LLA +GV ++V +NK+D E P +E R
Sbjct: 159 LLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 182
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 183 LDKLKAER 206
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 62.1 bits (144), Expect = 4e-10
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +2
Query: 236 LEVRN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 415
LE + + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH
Sbjct: 106 LEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHL 158
Query: 416 LLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 502
LLA +GV ++V +NK+D E P +E R
Sbjct: 159 LLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 182
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 183 LDKLKAER 206
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 442
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 443 QLIVGVNKMDSTEPPYSEPRFEKSRR 520
++I+ +NK D E +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 27 INIVVIGHVDSGKSTTT 77
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 442
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 443 QLIVGVNKMD 472
QL+V VNK+D
Sbjct: 258 QLVVAVNKID 267
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/68 (42%), Positives = 35/68 (51%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 210 RGITIDIA 233
RGIT+ A
Sbjct: 74 RGITVQSA 81
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 210 RGITIDIA 233
RGITI A
Sbjct: 96 RGITIQSA 103
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 442
+ IID PGH DF + D AVL++ G G G+ T L + +
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTVNRQLARYNV--- 165
Query: 443 QLIVGVNKMD 472
I VNKMD
Sbjct: 166 PFICFVNKMD 175
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +2
Query: 260 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 439
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 440 KQLIVGVNKMDSTEPPYSEPRFEK 511
L++ NK+D + + +E+
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQ 205
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 35.1 bits (77), Expect = 0.050
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +2
Query: 242 VRN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 421
+R+ Y + +ID PGH DF + + D +L+VAA G QT + L
Sbjct: 97 LRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWL 149
Query: 422 AFTLGVKQLIVGVNKMD 472
AF + Q+I +NK+D
Sbjct: 150 AFEKNI-QIIPVINKID 165
Score = 34.3 bits (75), Expect = 0.087
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 210 RGITI 224
RGIT+
Sbjct: 86 RGITV 90
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 465 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 337
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 101
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 257 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 367
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 101
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 257 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 367
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +2
Query: 269 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 448
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 449 IVGVNKMDSTEPPYSEPR 502
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 245 RN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 367
R+ Y + IID PGH +F M AD V++V A G
Sbjct: 197 RSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 245 RN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 367
R+ Y + IID PGH +F M AD V++V A G
Sbjct: 72 RSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 108 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 108 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 527 PHTSRRLATTQLLSLSCPFLD 589
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 527 PHTSRRLATTQLLSLSCPFLD 589
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 527 PHTSRRLATTQLLSLSCPFLD 589
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 527 PHTSRRLATTQLLSLSCPFLD 589
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 27 INIVVIGHVDSGKSTTT 77
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 263 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 358
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 352
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 352
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -3
Query: 448 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 290
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 289 VSRSINDGNI 260
S S +D I
Sbjct: 84 FSGSKSDAEI 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,607,812
Number of Sequences: 27780
Number of extensions: 352864
Number of successful extensions: 1141
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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