Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021288
(708 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 177 1e-46
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 177 1e-46
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 177 1e-46
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 173 1e-45
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 7e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.7
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 177 bits (430), Expect = 1e-46
Identities = 83/90 (92%), Positives = 88/90 (97%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL
Sbjct: 11 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 70
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRFEKSRRK 523
GVKQLIVGVNKMDSTEPPYSE RFE+ +++
Sbjct: 71 GVKQLIVGVNKMDSTEPPYSETRFEEIKKE 100
Score = 138 bits (335), Expect = 4e-35
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +1
Query: 508 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 687
EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCL
Sbjct: 96 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCL 155
Query: 688 IEALDAI 708
IEALDAI
Sbjct: 156 IEALDAI 162
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 225 DIALWKFE 248
DIALWKFE
Sbjct: 1 DIALWKFE 8
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 177 bits (430), Expect = 1e-46
Identities = 83/90 (92%), Positives = 88/90 (97%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL
Sbjct: 27 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 86
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRFEKSRRK 523
GVKQLIVGVNKMDSTEPPYSE RFE+ +++
Sbjct: 87 GVKQLIVGVNKMDSTEPPYSETRFEEIKKE 116
Score = 138 bits (335), Expect = 4e-35
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +1
Query: 508 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 687
EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCL
Sbjct: 112 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCL 171
Query: 688 IEALDAI 708
IEALDAI
Sbjct: 172 IEALDAI 178
Score = 55.2 bits (127), Expect = 6e-10
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 177 WVLDKLKAERERGITIDIALWKFE 248
WVLDKLKAERERGITIDIALWKFE
Sbjct: 1 WVLDKLKAERERGITIDIALWKFE 24
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 177 bits (430), Expect = 1e-46
Identities = 83/90 (92%), Positives = 88/90 (97%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL
Sbjct: 84 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 143
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRFEKSRRK 523
GVKQLIVGVNKMDSTEPPYSE RFE+ +++
Sbjct: 144 GVKQLIVGVNKMDSTEPPYSETRFEEIKKE 173
Score = 173 bits (421), Expect = 1e-45
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 138 bits (335), Expect = 4e-35
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +1
Query: 508 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 687
EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCL
Sbjct: 169 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCL 228
Query: 688 IEALDAI 708
IEALDAI
Sbjct: 229 IEALDAI 235
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 173 bits (421), Expect = 1e-45
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 171 bits (416), Expect = 6e-45
Identities = 80/90 (88%), Positives = 86/90 (95%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTL
Sbjct: 84 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTL 143
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRFEKSRRK 523
GVKQLIVGVNKMD T+PPYSE RFE+ +++
Sbjct: 144 GVKQLIVGVNKMDMTDPPYSEARFEEIKKE 173
Score = 130 bits (315), Expect = 1e-32
Identities = 59/71 (83%), Positives = 64/71 (90%)
Frame = +1
Query: 496 AQI*EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 675
A+ EIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+G AD
Sbjct: 165 ARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNAD 224
Query: 676 GKCLIEALDAI 708
GK LIEALDAI
Sbjct: 225 GKTLIEALDAI 235
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 35.1 bits (77), Expect = 7e-04
Identities = 27/85 (31%), Positives = 39/85 (45%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 442
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 443 QLIVGVNKMDSTEPPYSEPRFEKSR 517
+IV +NK+D + ++E ++
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAK 271
Score = 25.4 bits (53), Expect = 0.53
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 18 KTHINIVVIGHVDSGKST 71
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 27 INIVVIGHVDSGKST 71
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 624 FG*RLQHVVSVPSRNGHESDSSWV 553
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,756
Number of Sequences: 438
Number of extensions: 4497
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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