Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021288
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 157 5e-39
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 157 5e-39
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 157 5e-39
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 157 5e-39
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 101 6e-22
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 91 7e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 62 3e-10
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 62 5e-10
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.007
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.009
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.009
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 37 0.011
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 35 0.061
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 34 0.11
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 34 0.11
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 34 0.11
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 33 0.14
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 33 0.14
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.25
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.25
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.75
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 30 1.3
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 30 1.3
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.3
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.3
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.7
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.3
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.0
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.3
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 5.3
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 5.3
At5g13650.2 68418.m01585 elongation factor family protein contai... 28 7.0
At5g13650.1 68418.m01584 elongation factor family protein contai... 28 7.0
At3g48610.1 68416.m05307 phosphoesterase family protein low simi... 27 9.2
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 157 bits (382), Expect = 5e-39
Identities = 74/81 (91%), Positives = 75/81 (92%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 142 bits (343), Expect = 3e-34
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTL
Sbjct: 84 KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTL 143
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRFEK 511
GVKQ+I NKMD+T P YS+ R+++
Sbjct: 144 GVKQMICCCNKMDATTPKYSKARYDE 169
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +1
Query: 508 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 642
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (382), Expect = 5e-39
Identities = 74/81 (91%), Positives = 75/81 (92%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 142 bits (343), Expect = 3e-34
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTL
Sbjct: 84 KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTL 143
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRFEK 511
GVKQ+I NKMD+T P YS+ R+++
Sbjct: 144 GVKQMICCCNKMDATTPKYSKARYDE 169
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +1
Query: 508 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 642
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (382), Expect = 5e-39
Identities = 74/81 (91%), Positives = 75/81 (92%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 142 bits (343), Expect = 3e-34
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTL
Sbjct: 84 KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTL 143
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRFEK 511
GVKQ+I NKMD+T P YS+ R+++
Sbjct: 144 GVKQMICCCNKMDATTPKYSKARYDE 169
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +1
Query: 508 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 642
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (382), Expect = 5e-39
Identities = 74/81 (91%), Positives = 75/81 (92%)
Frame = +3
Query: 6 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 186 DKLKAERERGITIDIALWKFE 248
DKLKAERERGITIDIALWKFE
Sbjct: 61 DKLKAERERGITIDIALWKFE 81
Score = 142 bits (343), Expect = 3e-34
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 433
+YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTL
Sbjct: 84 KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTL 143
Query: 434 GVKQLIVGVNKMDSTEPPYSEPRFEK 511
GVKQ+I NKMD+T P YS+ R+++
Sbjct: 144 GVKQMICCCNKMDATTPKYSKARYDE 169
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +1
Query: 508 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 642
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 101 bits (241), Expect = 6e-22
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = +2
Query: 266 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 445
TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LA TLGV +
Sbjct: 182 TILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSK 241
Query: 446 LIVGVNKMDSTEPPYSEPRFEKSRRK 523
LIV VNKMD +S+ R+++ +K
Sbjct: 242 LIVVVNKMDDPTVNWSKERYDEIEQK 267
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/78 (41%), Positives = 54/78 (69%)
Frame = +3
Query: 15 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 194
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 195 KAERERGITIDIALWKFE 248
+ ER +G T+++ FE
Sbjct: 158 EEERLKGKTVEVGRAHFE 175
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 508 EIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKG 642
EI++++ ++K GYN V F+PISG G NM + + PW+ G
Sbjct: 263 EIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFT 430
+++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA +
Sbjct: 316 RHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRG 375
Query: 431 LGVKQLIVGVNKMDSTEPPYSEPRFE 508
GV+Q+IV +NKMD YS+ RF+
Sbjct: 376 FGVEQVIVAINKMDIV--GYSKERFD 399
Score = 89.0 bits (211), Expect = 3e-18
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = +3
Query: 21 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 200
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 201 ERERGITIDIALWKF 245
ERERGIT+ +A+ F
Sbjct: 298 ERERGITMTVAVAYF 312
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +2
Query: 272 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 451
+D PGH D++KNMITG +Q D A+L+V+ G QT+EH LLA +GV ++
Sbjct: 147 VDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDMV 199
Query: 452 VGVNKMDSTE 481
V +NK D +
Sbjct: 200 VFLNKEDQVD 209
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/82 (32%), Positives = 39/82 (47%)
Frame = +3
Query: 3 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 182
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116
Query: 183 LDKLKAERERGITIDIALWKFE 248
+D ER RGITI+ A ++E
Sbjct: 117 IDAAPEERARGITINTATVEYE 138
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +2
Query: 272 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 451
+D PGH D++KNMITG +Q D +L+V+ G QT+EH LLA +GV L+
Sbjct: 135 VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLV 187
Query: 452 VGVNKMDSTEPP 487
+NK+D + P
Sbjct: 188 CFLNKVDVVDDP 199
Score = 35.1 bits (77), Expect = 0.046
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = +3
Query: 12 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAI---------------TKVLAEEGKAKAIAFDEIDK 107
Query: 192 LKAERERGITIDIALWKFE 248
E++RGITI A ++E
Sbjct: 108 APEEKKRGITIATAHVEYE 126
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/93 (26%), Positives = 44/93 (47%)
Frame = +2
Query: 260 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 439
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 440 KQLIVGVNKMDSTEPPYSEPRFEKSRRKYPHTS 538
K +I+ NK+D + + + E +R +T+
Sbjct: 174 KDIIIIQNKIDLIQENEAIKQHEDIQRFITNTN 206
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/81 (28%), Positives = 39/81 (48%)
Frame = +2
Query: 230 CSLEVRN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 409
C + +R +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR---HVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 410 HALLAFTLGVKQLIVGVNKMD 472
H + +K +I+ NK+D
Sbjct: 172 HLASVDMMRLKHIIILQNKID 192
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/81 (28%), Positives = 39/81 (48%)
Frame = +2
Query: 230 CSLEVRN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 409
C + +R +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR---HVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 410 HALLAFTLGVKQLIVGVNKMD 472
H + +K +I+ NK+D
Sbjct: 172 HLASVDMMRLKHIIILQNKID 192
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 260 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 439
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 122 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQL 175
Query: 440 KQLIVGVNKMD 472
K +I+ NK+D
Sbjct: 176 KHIIILQNKID 186
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 34.7 bits (76), Expect = 0.061
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 18 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 197
K + NI ++ H+D+GK+TTT ++Y G + E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGR---------NYKIGEVHEGTATMDW----ME 140
Query: 198 AERERGITIDIA 233
E+ERGITI A
Sbjct: 141 QEQERGITITSA 152
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 233 SLEVRN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 367
S+ ++ Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 66 SISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGG 104
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 245 RN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 367
R+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 245 RN*QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 367
R+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 210 RGITIDIA 233
+GITI A
Sbjct: 117 KGITIQSA 124
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 257 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 412
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 210 RGITIDIA 233
+GITI A
Sbjct: 117 KGITIQSA 124
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 257 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 412
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/89 (29%), Positives = 41/89 (46%)
Frame = +2
Query: 257 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 436
Y + +ID PGH DF + S A+L+V A G QT + LAF
Sbjct: 135 YLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLAFEAN 187
Query: 437 VKQLIVGVNKMDSTEPPYSEPRFEKSRRK 523
+ ++ +NK+D P ++P K++ K
Sbjct: 188 L-TIVPVINKIDQ---PTADPERVKAQLK 212
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +3
Query: 3 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 182
K EK N +I H+D GKST L+ G I K G G +Y
Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY--- 102
Query: 183 LDKLKAERERGITI 224
LDKL +RERGIT+
Sbjct: 103 LDKL--QRERGITV 114
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 367
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.1 bits (67), Expect = 0.75
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 210 RGITIDI 230
RGITI +
Sbjct: 132 RGITIKL 138
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 257 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 367
+ + +ID PGH DF + + + A+L+V A G
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = -3
Query: 445 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDG 266
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNNTR 770
Query: 265 NIVLLVSN 242
+ L++N
Sbjct: 771 TVQRLMTN 778
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 272 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 448
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 449 IVGVNKMDSTE 481
+ +DS E
Sbjct: 286 NLSTFTLDSDE 296
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 269 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 448
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 449 IVGVNKMD 472
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 442
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 443 QLIVGVNKMD 472
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 269 IIDAPGHRDFIKNMITGTSQADCAVLIV 352
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 269 IIDAPGHRDFIKNMITGTSQADCAVLIV 352
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 254 QYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 352
+Y + +ID+PGH DF + D A+++V
Sbjct: 97 EYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCG 101
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 607 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 705
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 543 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 644
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +2
Query: 515 RRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVRKAKLTEN 682
+R SR + QLL S CP L G TCWS + R D W +
Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186
Query: 683 ASLKLSMP 706
A KLSMP
Sbjct: 187 A--KLSMP 192
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 272 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 451
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 452 VGVNKMD 472
+ +NK+D
Sbjct: 609 IAINKID 615
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 27.9 bits (59), Expect = 7.0
Identities = 26/81 (32%), Positives = 35/81 (43%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 442
V IID PGH DF + + D +L+V + G QTR A G
Sbjct: 148 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 199
Query: 443 QLIVGVNKMDSTEPPYSEPRF 505
++V VNK+D P + P F
Sbjct: 200 AVVVVVNKIDR---PSARPEF 217
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 27.9 bits (59), Expect = 7.0
Identities = 26/81 (32%), Positives = 35/81 (43%)
Frame = +2
Query: 263 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 442
V IID PGH DF + + D +L+V + G QTR A G
Sbjct: 147 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 198
Query: 443 QLIVGVNKMDSTEPPYSEPRF 505
++V VNK+D P + P F
Sbjct: 199 AVVVVVNKIDR---PSARPEF 216
>At3g48610.1 68416.m05307 phosphoesterase family protein low
similarity to SP|P95246 Phospholipase C 2 precursor (EC
3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam
profile PF04185: Phosphoesterase family
Length = 520
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = -3
Query: 463 VYSYDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVS 284
++ YD F + ++ +G L LTV+ F+ G + D+H + + V +
Sbjct: 239 LHQYDLKF--KKDAAKGKLPSLTVIEPRYFDLKGLPANDDHPSHDVANGQKLVKEVYEAL 296
Query: 283 RSINDGNIVLLVSNF 239
RS N LLV +
Sbjct: 297 RSSPQWNETLLVITY 311
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,909,849
Number of Sequences: 28952
Number of extensions: 336526
Number of successful extensions: 1057
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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