Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021287
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066990-1|AAH66990.1|  316|Homo sapiens hypothetical LOC441242 ...    31   4.4  
AY004310-1|AAF86614.1|  375|Homo sapiens c-Mpl binding protein p...    31   5.8  
AK125113-1|BAC86052.1|  654|Homo sapiens protein ( Homo sapiens ...    31   5.8  
AK055521-1|BAB70940.1|  605|Homo sapiens protein ( Homo sapiens ...    31   5.8  

>BC066990-1|AAH66990.1|  316|Homo sapiens hypothetical LOC441242
           protein.
          Length = 316

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +3

Query: 162 NPIAQSTRHRSHLLWHFTSSSCRS*GHRNSPLFEHWN----HLARVPSTVMYM 308
           N +A  +  R   L H+  SSC    H++   F+H+N    H+ R PST+  M
Sbjct: 264 NSLASVSFSRPMFLRHYPFSSCECKSHKHGSTFDHFNCLTFHVTR-PSTIESM 315


>AY004310-1|AAF86614.1|  375|Homo sapiens c-Mpl binding protein
           protein.
          Length = 375

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 27  GFHQFSRYSRQHHPPRRHNGSPSGNRHQQF-PSQASTLPI 143
           G  Q +RYS ++ P  RHN + +G++ Q +   + STL +
Sbjct: 326 GDGQLNRYSSRNFPAERHNPTVTGHQEQTYLQKETSTLQV 365


>AK125113-1|BAC86052.1|  654|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43123 fis, clone CTONG3003972. ).
          Length = 654

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 27  GFHQFSRYSRQHHPPRRHNGSPSGNRHQQF-PSQASTLPI 143
           G  Q +RYS ++ P  RHN + +G++ Q +   + STL +
Sbjct: 326 GDGQLNRYSSRNFPAERHNPTVTGHQEQTYLQKETSTLQV 365


>AK055521-1|BAB70940.1|  605|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30959 fis, clone HCASM2000307. ).
          Length = 605

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 27  GFHQFSRYSRQHHPPRRHNGSPSGNRHQQF-PSQASTLPI 143
           G  Q +RYS ++ P  RHN + +G++ Q +   + STL +
Sbjct: 297 GDGQLNRYSSRNFPAERHNPTVTGHQEQTYLQKETSTLQV 336


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,467,669
Number of Sequences: 237096
Number of extensions: 2884324
Number of successful extensions: 6127
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6110
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)