Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021286
(739 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 6e-37
SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 3e-34
SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 2e-31
SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056) 85 7e-17
SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0) 58 1e-08
SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0) 32 0.56
SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23) 31 0.74
SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20) 31 0.97
SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_43848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_21435| Best HMM Match : DUF846 (HMM E-Value=4.3e-35) 28 6.9
SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05) 28 9.1
SB_50759| Best HMM Match : PH (HMM E-Value=0.07) 28 9.1
>SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 151 bits (366), Expect = 6e-37
Identities = 66/85 (77%), Positives = 79/85 (92%)
Frame = +2
Query: 254 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 433
TGM+++CGEITS ANVDYQKVVR+T+K IGYDDSSKGFDYKTC+V+ A++QQSP+IA GV
Sbjct: 6 TGMIVVCGEITSLANVDYQKVVRDTIKQIGYDDSSKGFDYKTCTVLQAIEQQSPDIAQGV 65
Query: 434 HENRNDEEVGAGDQGLMFGYATDET 508
H R+DE++GAGDQGLMFGYATDET
Sbjct: 66 HIGRSDEDLGAGDQGLMFGYATDET 90
Score = 103 bits (247), Expect = 2e-22
Identities = 46/75 (61%), Positives = 56/75 (74%)
Frame = +1
Query: 511 ECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSL 690
E MPLTVVLAH LN+++A+ RRNG W RPDSKTQVT EY F GG VP RVHT+V+S+
Sbjct: 92 ELMPLTVVLAHGLNKRLADCRRNGSLPWVRPDSKTQVTVEYKFQGGKAVPLRVHTIVISV 151
Query: 691 QHSEKITLETLRDEI 735
QH I L+ +R E+
Sbjct: 152 QHDPNIELDVMRKEL 166
>SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 142 bits (344), Expect = 3e-34
Identities = 64/86 (74%), Positives = 75/86 (87%)
Frame = +2
Query: 254 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 433
TGM+LLCGEITS A VDYQ VVR+ +K IGYDDS KGFDYKTC+V++AL+QQS +IA GV
Sbjct: 75 TGMILLCGEITSNAVVDYQSVVRQCIKDIGYDDSEKGFDYKTCNVLVALEQQSVDIAHGV 134
Query: 434 HENRNDEEVGAGDQGLMFGYATDETK 511
H R +E+VGAGDQGLMFGYATDET+
Sbjct: 135 HVGREEEDVGAGDQGLMFGYATDETE 160
Score = 108 bits (260), Expect = 4e-24
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLTVVLAHK+NQK+AE RR+G WARPDSKTQVT EY F G +P RVHT+V+S
Sbjct: 160 EELMPLTVVLAHKMNQKLAEYRRDGTLPWARPDSKTQVTVEYKFEHGRAIPLRVHTIVIS 219
Query: 688 LQHSEKITLETLRDEI 735
+QH IT+E LR E+
Sbjct: 220 VQHDPTITMENLRKEL 235
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = +3
Query: 117 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 254
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACET+ K
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAK 74
>SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 133 bits (321), Expect = 2e-31
Identities = 61/86 (70%), Positives = 71/86 (82%)
Frame = +2
Query: 254 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 433
TG+VLL GEITS A VDYQ VVR T++ IGY+DSS GFDYKTCSV+LA+ +Q IA V
Sbjct: 96 TGLVLLFGEITSNARVDYQAVVRNTIRDIGYNDSSTGFDYKTCSVLLAIQEQVAEIAQTV 155
Query: 434 HENRNDEEVGAGDQGLMFGYATDETK 511
H NR D+E+GAGDQGLMFGYATDET+
Sbjct: 156 HLNRRDDEIGAGDQGLMFGYATDETE 181
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/52 (76%), Positives = 41/52 (78%)
Frame = +3
Query: 99 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 254
Y D FLFTSESV EGH DKMCDQISDA+LDAHL QDP AKVACET TK
Sbjct: 44 YSTSDCDNFLFTSESVNEGHSDKMCDQISDAVLDAHLEQDPYAKVACETATK 95
Score = 81.0 bits (191), Expect = 9e-16
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLT VLAHKL ++AE R+ W PD KTQVT +Y GA +P+RVHTV++S
Sbjct: 181 EELMPLTTVLAHKLCARLAECRKGKILPWLLPDGKTQVTVDYRLERGACIPERVHTVLIS 240
Query: 688 LQHSEKITLETLRDEIR 738
QH+ + +E +R ++
Sbjct: 241 TQHTPDVGIEEIRHHLK 257
>SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 90.2 bits (214), Expect = 2e-18
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +3
Query: 117 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 254
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACE++ K
Sbjct: 9 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACESVAK 54
Score = 68.1 bits (159), Expect = 7e-12
Identities = 29/36 (80%), Positives = 34/36 (94%)
Frame = +2
Query: 254 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSK 361
TGM+++CGEITS ANVDYQKVVR+T+K IGYDDSSK
Sbjct: 55 TGMIVVCGEITSLANVDYQKVVRDTIKQIGYDDSSK 90
>SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056)
Length = 70
Score = 84.6 bits (200), Expect = 7e-17
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +3
Query: 117 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 239
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVAC
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVAC 69
>SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0)
Length = 192
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +1
Query: 517 MPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQH 696
MP V AH+L ++ +ELRRNG W RPD+K+QVT + G + +V VV+S QH
Sbjct: 30 MPAPVYYAHRLVERQSELRRNGTLPWLRPDAKSQVTINW--EGDS---PKVDAVVLSTQH 84
Query: 697 SEKITLETLRDEI 735
I+L+ LR+ +
Sbjct: 85 DPSISLDDLREAV 97
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 452 EEVGAGDQGLMFGYATDET 508
E+ GAGDQGLMFGYAT+ET
Sbjct: 8 EDQGAGDQGLMFGYATNET 26
>SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 1 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 135
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 416 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 461
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 1 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 135
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 70 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 115
>SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0)
Length = 550
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -1
Query: 310 LIIHVSFGCDFATQ--KHHTGLVMVSHATFASGS*FRCASRIASLIWSHILSG 158
L H++F C + H +S + A + FRC+ R S++W H+ +G
Sbjct: 263 LTCHLNFACRVCRTYPRLHVIPSSISDSDLAKVASFRCSGRFPSIVWRHMTNG 315
>SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23)
Length = 390
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 275 GEITSKANVDYQKVVRETV---KHIGYDDSSKGFDYK 376
GEITS N+D +K+ + K I YD G+DY+
Sbjct: 103 GEITSNVNIDREKLPGSNLLEFKAIAYDAKGAGYDYR 139
>SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20)
Length = 681
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 497 LHNRTSSPGLLPQLPRHFCSHAPQQQCLVIVGL 399
L N T+ P + PQ P H SHA + ++I G+
Sbjct: 99 LGNETARPAIAPQEPEHLVSHANKILTVIIQGM 131
>SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 147 GEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKPVWCFCVAKSHPKL 296
G G D++ + +L A +N A T TKPV + +A HP++
Sbjct: 391 GLGRLDRLVEAFVYTVLGAQVNVRSSIANAINTETKPVGAYNMAGGHPRV 440
>SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1155
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 48 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 224
MP G +K N + D D +L +S+ + D++C + I AHL QDPD
Sbjct: 196 MPYGGGKRGKSKKNSSTLDTGDLETWLKGRKSITRVRNHDELCAARALVIGMAHLTQDPD 255
>SB_43848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 515 HSLSHLLHNRTSSPGLLPQLPRHFCSHAPQQQCLVIVGLVRASHCMS 375
H +SH L + P ++ H SH P CL I+G + H +S
Sbjct: 325 HRVSHFLSSGIPLP-IIGLSSHHRVSHFPSSGCLPIIGYPTSHHRVS 370
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 48 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 224
MP + G +K N + D D +L S+ + D++C + I AHL +DPD
Sbjct: 241 MPFGAGKRGKSKKNSSTLDTGDLETWLKGKRSITRVRNHDELCAARATVIGMAHLTKDPD 300
>SB_21435| Best HMM Match : DUF846 (HMM E-Value=4.3e-35)
Length = 323
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 331 DRFAHNFLIIHVSFGCDFATQKHHTGLVMV 242
D F NF++I + CDF T K+ +G ++V
Sbjct: 208 DSFITNFVVIVLLLSCDFWTVKNVSGRLLV 237
>SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05)
Length = 284
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +1
Query: 451 RGSWGRRPGLDVRLCNR*DKECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCE 630
+GS G +PG D R ++ D+E P +++ ++++ + + N F + + +VT E
Sbjct: 39 QGSAGEKPGTDSRKSSKMDQENRPEAILVHNEVHPESDKETHNPGFARSLSTRERRVTLE 98
Query: 631 Y 633
+
Sbjct: 99 W 99
>SB_50759| Best HMM Match : PH (HMM E-Value=0.07)
Length = 320
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 216 DPDAKVACETITKPVWCFCVAKSHPKLTWIIKKLCAKRSNI 338
DPD + C+ +T+P+ + +A SH T+++ + RS+I
Sbjct: 265 DPDQQNICQDMTQPLSHYFIASSHN--TYLLDNQLSGRSSI 303
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,506,502
Number of Sequences: 59808
Number of extensions: 590608
Number of successful extensions: 1720
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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