Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021286
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 148 4e-36
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 148 4e-36
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 145 3e-35
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 144 8e-35
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 140 7e-34
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 137 9e-33
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 106 1e-23
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 106 1e-23
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 89 3e-18
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z49937-8|CAD44113.1| 546|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z49867-4|CAD44109.1| 546|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical ... 29 3.4
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 29 4.5
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 29 4.5
Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical pr... 28 7.9
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 148 bits (359), Expect = 4e-36
Identities = 70/113 (61%), Positives = 89/113 (78%), Gaps = 3/113 (2%)
Frame = +2
Query: 254 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 433
TGM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGV
Sbjct: 50 TGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV 109
Query: 434 HENRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEME 583
H +++ ++VGAGDQG+MFGYATDET+ A L + +L+ SGE+E
Sbjct: 110 HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 162
Score = 107 bits (256), Expect = 1e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 135 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVIS 194
Query: 688 LQHSEKITLETLRDEI 735
QHS I+L+ LR E+
Sbjct: 195 TQHSPDISLDDLRKEL 210
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 123 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 254
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TK
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 148 bits (359), Expect = 4e-36
Identities = 70/113 (61%), Positives = 89/113 (78%), Gaps = 3/113 (2%)
Frame = +2
Query: 254 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 433
TGM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGV
Sbjct: 50 TGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV 109
Query: 434 HENRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEME 583
H +++ ++VGAGDQG+MFGYATDET+ A L + +L+ SGE+E
Sbjct: 110 HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 162
Score = 107 bits (256), Expect = 1e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 135 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVIS 194
Query: 688 LQHSEKITLETLRDEI 735
QHS I+L+ LR E+
Sbjct: 195 TQHSPDISLDDLRKEL 210
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 123 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 254
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TK
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 145 bits (351), Expect = 3e-35
Identities = 70/113 (61%), Positives = 88/113 (77%), Gaps = 3/113 (2%)
Frame = +2
Query: 254 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 433
TGM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGV
Sbjct: 50 TGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV 109
Query: 434 HENRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEME 583
H +++ +VGAGDQG+MFGYATDET+ A L + +L+ SGE+E
Sbjct: 110 HVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE 162
Score = 106 bits (255), Expect = 1e-23
Identities = 50/76 (65%), Positives = 59/76 (77%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLT++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 135 EEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVIS 194
Query: 688 LQHSEKITLETLRDEI 735
QHS I+LE LR E+
Sbjct: 195 TQHSPDISLEDLRKEL 210
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 123 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 254
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TK
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 144 bits (348), Expect = 8e-35
Identities = 68/111 (61%), Positives = 87/111 (78%), Gaps = 3/111 (2%)
Frame = +2
Query: 260 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 439
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 440 NRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEME 583
+++ ++VGAGDQG+MFGYATDET+ A L + +L+ SGE+E
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 111
Score = 107 bits (256), Expect = 1e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 84 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVIS 143
Query: 688 LQHSEKITLETLRDEI 735
QHS I+L+ LR E+
Sbjct: 144 TQHSPDISLDDLRKEL 159
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 140 bits (340), Expect = 7e-34
Identities = 68/111 (61%), Positives = 86/111 (77%), Gaps = 3/111 (2%)
Frame = +2
Query: 260 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 439
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 440 NRNDEEVGAGDQGLMFGYATDETKNACR*L*CLH---TNSIRKLQSSGEME 583
+++ +VGAGDQG+MFGYATDET+ A L + +L+ SGE+E
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE 111
Score = 106 bits (255), Expect = 1e-23
Identities = 50/76 (65%), Positives = 59/76 (77%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLT++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 84 EEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVIS 143
Query: 688 LQHSEKITLETLRDEI 735
QHS I+LE LR E+
Sbjct: 144 TQHSPDISLEDLRKEL 159
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 137 bits (331), Expect = 9e-33
Identities = 61/86 (70%), Positives = 76/86 (88%)
Frame = +2
Query: 254 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGV 433
TGMV+LCGEITSKA VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGV
Sbjct: 49 TGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGV 108
Query: 434 HENRNDEEVGAGDQGLMFGYATDETK 511
H N++ E+VGAGDQG+MFGYATDET+
Sbjct: 109 HVNKDGEDVGAGDQGIMFGYATDETE 134
Score = 100 bits (240), Expect = 9e-22
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLT++L+HK+N ++ +LRRNG W RPDSK+QVT EY GAT+P RVHTVVVS
Sbjct: 134 EETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVS 193
Query: 688 LQHSEKITLETLRDEI 735
QHS +TLE LR+ I
Sbjct: 194 TQHSPDVTLEKLRETI 209
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = +3
Query: 117 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 254
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TK
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTK 48
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 106 bits (255), Expect = 1e-23
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTVV+S
Sbjct: 94 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVIS 153
Query: 688 LQHSEKITLETLRDEI 735
QHS I+L+ LR E+
Sbjct: 154 TQHSPDISLDDLRKEL 169
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 6/89 (6%)
Frame = +2
Query: 335 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 505
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 506 TKNACR*L*CLH---TNSIRKLQSSGEME 583
T+ A L + +L+ SGE+E
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELE 121
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 123 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 239
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 106 bits (255), Expect = 1e-23
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = +1
Query: 508 KECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 687
+E MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTVV+S
Sbjct: 76 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVIS 135
Query: 688 LQHSEKITLETLRDEI 735
QHS I+L+ LR E+
Sbjct: 136 TQHSPDISLDDLRKEL 151
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Frame = +2
Query: 341 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETKNAC 520
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDET+ A
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 521 R*L*CLH---TNSIRKLQSSGEME 583
L + +L+ SGE+E
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELE 103
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 123 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITK 254
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TK
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +2
Query: 254 TGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKG 364
TGM++LCGEITSKA VDYQ +VR +K IGYDDSSKG
Sbjct: 50 TGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKG 86
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 123 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 239
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 123 FLFTSESVGEGHPDKMCDQ 179
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z49937-8|CAD44113.1| 546|Caenorhabditis elegans Hypothetical
protein C33D3.5 protein.
Length = 546
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -3
Query: 644 PANTYSQVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTVNGMHSLSHLLHNRTSSPGL 468
PA+T+ ++ L +QNS F L +A L S + H ++H + N +S G+
Sbjct: 96 PASTFFSAVNDIQNQLINQNSAFNLDNATEAPILSGSVFESLSHDITHTIINNSSENGV 154
>Z49867-4|CAD44109.1| 546|Caenorhabditis elegans Hypothetical
protein C33D3.5 protein.
Length = 546
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -3
Query: 644 PANTYSQVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTVNGMHSLSHLLHNRTSSPGL 468
PA+T+ ++ L +QNS F L +A L S + H ++H + N +S G+
Sbjct: 96 PASTFFSAVNDIQNQLINQNSAFNLDNATEAPILSGSVFESLSHDITHTIINNSSENGV 154
>AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical
protein H06H21.6 protein.
Length = 437
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 126 LFTSESVGEGHPDKMCDQISDA--ILDAHLNQDPDAKVACETITKPVWCFCVAKSHPKLT 299
L+TSE +GE H D + D L +++ D + I + + + K HPK T
Sbjct: 123 LYTSELLGEHHIRSKADLLEDIKNFLSDQISEADDEN--DKVIAAVLMLYSLNKKHPKET 180
Query: 300 WIIKKLCAKRSNIL 341
I+ +C NIL
Sbjct: 181 -AIETICKYCQNIL 193
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 614 HRLLANMYLLVVQQSHREFIL*SC 685
H L++ + +LVVQ+ +REFI SC
Sbjct: 287 HGLVSTLVMLVVQKPYREFISKSC 310
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 243 TITKPVWCFCVAKSHPKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 380
T ++P PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 238 TSSQPPPVVICRNDEPKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical
protein D1086.5 protein.
Length = 225
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 162 DKMCDQISDAILDAHLNQDPDAKVACETITKPVWCF 269
+K DQ+S+ + D N++PD KV C +I CF
Sbjct: 122 EKTPDQVSECVKDYLKNKNPD-KVDCVSIQTKSKCF 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,782,290
Number of Sequences: 27780
Number of extensions: 435737
Number of successful extensions: 1238
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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