Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021285
         (750 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0776 + 7533790-7533984,7534234-7534419,7534542-7534631,753...    28   6.9  
02_05_0888 - 32517876-32518087,32518320-32518694,32519551-325196...    28   6.9  
07_03_1568 - 27788314-27788619,27789125-27789294,27789868-277899...    28   9.1  

>08_01_0776 +
           7533790-7533984,7534234-7534419,7534542-7534631,
           7535284-7535368,7535759-7535925,7536250-7536438,
           7537183-7537296,7537391-7537510,7537590-7537712,
           7538217-7538315,7538735-7538791,7539272-7539318,
           7539391-7539534,7540028-7540205,7540663-7540743,
           7540926-7541009,7541416-7541616
          Length = 719

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 154 LSESIDHDTNHKYHFKICHQNIFRHSV*IFREKGTDKISSELFK*NSFIP 303
           ++ES+    + ++H +IC     R  + +F   G + I  ELF   SF+P
Sbjct: 133 VTESLTITLSSEHHKEICRYLYNRQVLGVFDWSGVNPIPPELFLLPSFVP 182


>02_05_0888 -
           32517876-32518087,32518320-32518694,32519551-32519638,
           32520145-32520384,32521033-32521149,32521213-32521606,
           32521752-32521998,32522086-32522315,32522768-32522823,
           32522903-32523094,32523274-32523376,32523478-32523544,
           32524312-32525154,32525547-32525670,32525965-32526213,
           32526354-32526443,32526530-32526649,32526664-32526738,
           32527001-32527147,32527255-32527365,32527446-32527667,
           32527777-32527896,32527971-32528270,32528355-32528480,
           32529246-32529360,32529556-32530019,32530119-32530253,
           32530684-32530788,32530876-32531053,32531143-32531864
          Length = 2188

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 599 HARNG--LMALNYAISLCFATNDNFMKSV*QLLKIIISFTW 715
           H ++G  L AL  A+ + F TN+   KSV   +K  IS TW
Sbjct: 548 HEQHGTLLRALVSAMKVSFITNEGIQKSV-SFIKCAISSTW 587


>07_03_1568 -
           27788314-27788619,27789125-27789294,27789868-27789979,
           27790063-27790117,27790201-27790316,27790731-27790812,
           27790974-27791228,27791326-27791454,27791539-27791747
          Length = 477

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 521 ILPQPPQGSAPHHLNHFRLRVIQILNLSRDRVKKKTPTE 405
           + PQPP  +AP H+  FR      +   R  +K KT  E
Sbjct: 129 VAPQPPPHAAPEHVRIFREVTEPSVLCRRKSIKGKTVRE 167


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,647,473
Number of Sequences: 37544
Number of extensions: 300863
Number of successful extensions: 584
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)