Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021284
         (469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   7.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    20   9.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
 Frame = +3

Query: 330 SSRDGQRKGDRAHGPQENS------TNEPRADATAGRGTEAE 437
           S+  G +   + HGPQ +S      T E R  +T+ + TE E
Sbjct: 14  STGRGLKYSGQQHGPQSDSRNQQLRTGEKRKRSTSSQSTEGE 55


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 98  FEGIFKDCSNILDSKAKE 151
           FEG+ K   +ILD+K ++
Sbjct: 557 FEGLCKVMKSILDNKVEK 574


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 12/52 (23%), Positives = 22/52 (42%)
 Frame = -1

Query: 208 AGHKRRGQHLNVGSSGILRFLGLAVEDVTTIFEYSFEY*QRPPYLTDVAEHG 53
           A  K    H ++  S    F   ++ D+T    YS +    P  + ++ E+G
Sbjct: 235 AASKLNSFHWHITDSHSFPFTAESLPDLTKYGAYSPKKVYAPEEVAEIVEYG 286


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +3

Query: 195 RLWPADRSCRC 227
           ++W  +RSC C
Sbjct: 79  KIWQMERSCMC 89


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 128 ILDSKAKEAKNPGTP 172
           + D + KE +NP TP
Sbjct: 239 LTDEQLKELENPPTP 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,114
Number of Sequences: 336
Number of extensions: 1593
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)