Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021284
(469 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 32 0.26
04_04_1448 + 33679110-33679140,33679858-33680057,33680163-336802... 31 0.35
11_06_0507 + 24402239-24402297,24402686-24402753,24403704-244037... 31 0.46
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 30 0.81
08_02_0396 - 16654603-16655030,16655803-16655906,16655988-166565... 30 1.1
08_02_0225 + 14469037-14469064,14470004-14470215,14470324-144704... 30 1.1
07_03_0416 - 17962740-17963009,17963076-17963732 30 1.1
11_06_0516 + 24502645-24504507 29 1.4
06_03_0570 - 22363197-22363588,22363755-22366782 29 1.9
03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495 29 1.9
09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110... 29 2.5
03_05_0996 - 29547974-29547977,29548442-29548620,29548827-295489... 29 2.5
12_01_0026 + 219663-220843,222201-222447,222574-224535 27 5.7
11_01_0026 + 193383-194566,195726-195972,196099-198063 27 5.7
06_03_0540 - 21923763-21923945,21924027-21924776,21924895-219253... 27 5.7
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 7.5
07_03_0064 + 12995669-12995904,12996299-12996533,12998223-129983... 27 7.5
05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818 27 7.5
04_04_1425 + 33463039-33463330,33464370-33464460,33465299-334656... 27 7.5
04_01_0303 + 4132988-4133184,4133701-4134202,4134261-4134638,413... 27 7.5
04_01_0093 - 986981-987625 27 7.5
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 27 7.5
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 27 7.5
11_06_0066 - 19741883-19742263,19743001-19743231,19743378-197435... 27 10.0
04_03_1046 + 21974577-21975126,21975620-21975894,21976120-219762... 27 10.0
04_03_0351 - 14761728-14763086,14764742-14764957 27 10.0
03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685... 27 10.0
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 27 10.0
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 27 10.0
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +1
Query: 259 KEDTELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLN 438
K+D E L+ Q+E D+E ++ +++S E T LR+ RM E + L + L
Sbjct: 549 KKDREDLEMQMEQLALDYEILKQENHDISSRLEQ--TQLREQLRMQYECSAHLSIISDLE 606
Query: 439 SDV 447
++V
Sbjct: 607 ANV 609
>04_04_1448 +
33679110-33679140,33679858-33680057,33680163-33680272,
33680372-33680591,33680672-33680794,33680892-33680960,
33681915-33682157,33682235-33682297,33682414-33682477,
33682740-33682810
Length = 397
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/61 (26%), Positives = 36/61 (59%)
Frame = +1
Query: 265 DTELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLNSD 444
++E+ + + E Y A + ++ EKE+++T+LRK R++ + ++L + ++N D
Sbjct: 50 ESEIHQVEQEAYTGVLRAFKVQSDAISWEKESLITELRKELRVSDDEHREL--LNKVNED 107
Query: 445 V 447
V
Sbjct: 108 V 108
>11_06_0507 +
24402239-24402297,24402686-24402753,24403704-24403785,
24403894-24403945,24405368-24405413,24405568-24405626,
24405736-24405803,24406009-24406119,24406236-24406312,
24406478-24406554
Length = 232
Score = 31.1 bits (67), Expect = 0.46
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 298 YKSDFEAERESRQEMASEKETVL--TDLRKTQRMNQELTQQLDE 423
YK E ERE +E++ EKE L D RK +R E T+ E
Sbjct: 152 YKRQKEKEREKEKEISREKEMELKERDKRKREREGSEETEDTSE 195
>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 30.3 bits (65), Expect = 0.81
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 271 ELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRL 435
E+L AQL L + D + QE+ASE E+ + L + + EL + D+V L
Sbjct: 1448 EILSAQLALSEFDLNINKSICQELASELESCMAQL---SQKDDELLEAEDKVHLL 1499
>08_02_0396 -
16654603-16655030,16655803-16655906,16655988-16656579,
16656820-16656993,16657105-16657309
Length = 500
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 336 RDGQRKGDRAHG--PQENSTNEPRADATA--GRGTEAELGRLPEGHS 464
R GQ+ R HG +ST EPR A A GRG+ L +P G S
Sbjct: 13 RQGQQGHGRGHGRVSGSHSTIEPRNVAAAGRGRGSPLSLNDMPGGRS 59
>08_02_0225 +
14469037-14469064,14470004-14470215,14470324-14470433,
14470498-14470765,14470878-14471087,14471162-14471230,
14473346-14473591,14473672-14473740,14473808-14473871,
14474468-14474583
Length = 463
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 265 DTELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLN-S 441
+T++ + + + Y S A + ++ EKE ++T+LRK R++ + ++L + R+N
Sbjct: 53 ETQIHQLEQDAYCSVLRAFKAQSDAISWEKEGLITELRKELRVSDKEHREL--LNRVNGD 110
Query: 442 DVYQR 456
D+ QR
Sbjct: 111 DIIQR 115
>07_03_0416 - 17962740-17963009,17963076-17963732
Length = 308
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/67 (25%), Positives = 36/67 (53%)
Frame = +1
Query: 265 DTELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLNSD 444
+ +LLKAQL+++ F+ + + +T+ LR++Q +L +QL V ++++
Sbjct: 106 EIDLLKAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLEEQL-RVAKISTT 164
Query: 445 VYQRATA 465
+TA
Sbjct: 165 GASTSTA 171
>11_06_0516 + 24502645-24504507
Length = 620
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 334 DETLVPLRSRSCTVRVVLSKAPCP 263
++ LVPL +R T+R VL AP P
Sbjct: 19 EDILVPLLARLATIRTVLDNAPAP 42
>06_03_0570 - 22363197-22363588,22363755-22366782
Length = 1139
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 62 SNIGQVRGTLSIFEGIFKDCSNILDSKAKEAKNPGTPNIEML 187
S I +V G LS+F +F C + K K+AKNP P+ + L
Sbjct: 768 SYIAKVVG-LSVFCLVFLSCLAVFFLKRKKAKNPTDPSYKKL 808
>03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495
Length = 728
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 259 KEDTELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQ-RMNQELTQQL 417
K+ EL K ++ + +FEAER + ASE ++ L++ + M+ E Q L
Sbjct: 459 KQKVELGKKKMSILYKEFEAERSASAVAASEAMAMINRLQEEKASMHMEALQYL 512
>09_01_0076 +
1105331-1105453,1106559-1106705,1107046-1107195,
1107272-1107531,1107897-1108084,1108187-1108311,
1108485-1108521,1108802-1108893,1109023-1109133,
1109242-1109352,1109576-1109669,1109833-1109945,
1110316-1110411,1110510-1110617,1110665-1110814,
1110910-1110990,1111205-1111276,1111553-1111646,
1111759-1111787,1111870-1111967,1112065-1112160,
1112399-1112620,1113002-1113158,1113472-1113627,
1113703-1113930
Length = 1045
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +1
Query: 259 KEDTELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLN 438
+E+ +KAQ + + E E ++ + +E L LRK R N+ +L + +
Sbjct: 625 QEEIHSIKAQKVQLQHKIKQEAEQFRQWKATREKELLQLRKEGRRNEYERHKLQALNQRQ 684
Query: 439 SDVYQRAT 462
V QR T
Sbjct: 685 KLVLQRKT 692
>03_05_0996 -
29547974-29547977,29548442-29548620,29548827-29548905,
29549556-29549577,29550370-29550439,29550589-29550667,
29551252-29551268,29552214-29552295,29553540-29553630,
29554354-29554498,29554653-29554964
Length = 359
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 343 PSLDETLVPLRSRSCTVRVVLSKAPCPLSP 254
PSL + L +R TVR+ + +PCP+SP
Sbjct: 32 PSLIQCRRRLTNRPATVRLSPAPSPCPMSP 61
>12_01_0026 + 219663-220843,222201-222447,222574-224535
Length = 1129
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 310 SRSCTVRVVLSKAPCPLSPLQLIDLNFQHLQLLSAGHKRRGQHLNVGSS 164
S +C+ RV S+ L P ++ DLN +H QL + +NVG +
Sbjct: 640 SSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSINVGKT 688
>11_01_0026 + 193383-194566,195726-195972,196099-198063
Length = 1131
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 310 SRSCTVRVVLSKAPCPLSPLQLIDLNFQHLQLLSAGHKRRGQHLNVGSS 164
S +C+ RV S+ L P ++ DLN +H QL + +NVG +
Sbjct: 641 SSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSINVGKT 689
>06_03_0540 -
21923763-21923945,21924027-21924776,21924895-21925323,
21925509-21925619,21925715-21926040,21926130-21926251,
21926905-21927020,21927119-21927243,21927338-21927596
Length = 806
Score = 27.5 bits (58), Expect = 5.7
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +3
Query: 213 RSCRC*KLRSIS*RG-ERGHGAFESTTRTVQERLRSGTRVSSRDGQRKGDRAHGPQENST 389
+S C + +SIS + R + +++ + GT SS D G + ST
Sbjct: 208 KSSACVRTQSISHKSFSRIQKNWLLDKQSLHDHPEDGTPKSSGDTSYAGSHTCSSRSTST 267
Query: 390 NEPRADATAGRGTEAELGRLPEG 458
N ++ + GR LGR G
Sbjct: 268 NAGKSSGSHGRSLFGSLGRKTPG 290
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 284 HNSNCTRATSKRNESLVKRWPAKRRPCS 367
HN+NC +A S+ + L W A R C+
Sbjct: 3815 HNTNCQQAESELEDRLYFFWAAIERICN 3842
>07_03_0064 +
12995669-12995904,12996299-12996533,12998223-12998384,
12999446-12999566,13000095-13001608
Length = 755
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 312 RSGTRVSSRDGQRKGDRAHGPQENSTNEPRADATAGRGTEAELGRL 449
R+G + G R+GDR G E PRA+ A R EL RL
Sbjct: 705 RTGALALAESG-RRGDRDGGGIEVGVALPRAEMEAFRAFHVELVRL 749
>05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818
Length = 743
Score = 27.1 bits (57), Expect = 7.5
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +2
Query: 20 ELKQQLEKQHSAVLSNIGQVRGTLSIFEGIFKDCSNILDSKAKEAK------NPGTPNIE 181
EL +QL+++ + S+I Q +FEG ++ LDS + N I
Sbjct: 221 ELVEQLKQEIHRLKSSIAQAEDDKHVFEGKLREKLEALDSLQDKVNLLSQEVNAKEEAIR 280
Query: 182 MLTSALVARGQELQMLKV 235
L+S+L ++ ++ Q L++
Sbjct: 281 ELSSSLSSKEEDYQKLQL 298
>04_04_1425 +
33463039-33463330,33464370-33464460,33465299-33465656,
33465771-33465944,33466403-33466607,33466717-33466784,
33467279-33467360,33467513-33467549,33467822-33467913,
33469219-33469294,33469402-33469585,33469859-33469867
Length = 555
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 300 QERLRSGTRVSSRDGQRKGDRAHG--PQENSTNEPRADATAGRGTE 431
Q SG S D + + G P N N+P+ADA G E
Sbjct: 496 QSNANSGVESSGNDNPSCTNSSTGVPPTNNEVNDPKADAADGDSVE 541
>04_01_0303 +
4132988-4133184,4133701-4134202,4134261-4134638,
4134657-4135301
Length = 573
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 113 KDCSNILDSKAKEAK-NPGTPNIEMLTSALVARGQELQMLKVEI-DKL 250
+ CSN++ K E K +PG P I AL G + ++ ++ DKL
Sbjct: 332 EQCSNVILHKLPEKKKDPGCPTITCSIGALCDLGVSVSVMPKDVFDKL 379
>04_01_0093 - 986981-987625
Length = 214
Score = 27.1 bits (57), Expect = 7.5
Identities = 22/89 (24%), Positives = 45/89 (50%)
Frame = +2
Query: 8 AGLAELKQQLEKQHSAVLSNIGQVRGTLSIFEGIFKDCSNILDSKAKEAKNPGTPNIEML 187
A L E KQ+LEK+ S G + LS+ E + S + KA++ ++ E
Sbjct: 4 AELEEAKQELEKERSEKKKMAGCI---LSLQEELSNAMSELNKLKARDNEDDDGGG-EAA 59
Query: 188 TSALVARGQELQMLKVEIDKLKGRKRTRS 274
+ + ++L+ ++++ DK + R+++ S
Sbjct: 60 AKVIDLQVEDLKFVEIDDDKPQPRRQSPS 88
>02_04_0481 +
23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 262 EDTELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLNS 441
++ E LK L+ KSD E + + E +E E + L + ++L Q DE+ +
Sbjct: 744 QEREGLKQVLDEKKSDIEKLKHALDEKNAELENLKQTLDGNNSVLEKLKQAWDELNSESE 803
Query: 442 DVYQ 453
++ Q
Sbjct: 804 NIKQ 807
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 27.1 bits (57), Expect = 7.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 259 KEDTELLKAQLELYKSDFEAER---ESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVR 429
+E+ L +L+ K+ E E +S +E E LTD R +L+ +LDE
Sbjct: 476 RENIAALNKELDATKAMLENEVAAVKSLRESLQSTEEALTDSRSEV---SKLSVELDEAN 532
Query: 430 RLNSDV 447
R+N D+
Sbjct: 533 RMNQDL 538
>11_06_0066 -
19741883-19742263,19743001-19743231,19743378-19743530,
19743667-19743726,19743806-19743874,19744639-19744719,
19744818-19744920,19745392-19745534,19745621-19745683,
19745803-19745870,19745974-19746055,19746147-19746260,
19746362-19746570,19746647-19746818
Length = 642
Score = 26.6 bits (56), Expect = 10.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 265 DTELLKAQLELYKSDFEAERESRQEMASE--KETVL---TDLRKTQRMNQELTQQLDEVR 429
D LLK Q K + E R+ Q SE ++ +L D+ K++ L +LDE R
Sbjct: 349 DAALLKRQ----KQEIEELRKKLQGSHSEVLEQVILKQRNDMHKSELERDRLAMELDEER 404
Query: 430 RLNSDVYQR 456
RL + R
Sbjct: 405 RLRETLEHR 413
>04_03_1046 +
21974577-21975126,21975620-21975894,21976120-21976284,
21976352-21976441,21977723-21978097
Length = 484
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 274 LLKAQLELYKSDFEAERESRQEMAS---EKETVLTDLRKTQRMNQELTQQLDEVRRLNSD 444
L KA+ E + E +R E AS EK+T + ++M ++ ++ +E+RRL D
Sbjct: 408 LEKAEQESNNAREENKRFRESEKASKEQEKQTEAEIQKLKEKMEKDREEREEEIRRLRDD 467
Query: 445 V 447
+
Sbjct: 468 L 468
>04_03_0351 - 14761728-14763086,14764742-14764957
Length = 524
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 360 RAHGPQENSTNEPRADATAGRGTEAEL 440
+A G E S+NE AT +GT+ EL
Sbjct: 334 KAPGTAETSSNESDVKATKDKGTDGEL 360
>03_05_0967 +
29265465-29266214,29267718-29267944,29268428-29268557,
29268651-29268719,29268803-29268946,29269775-29270011,
29270897-29270998,29271131-29271396,29271766-29273410,
29274449-29275018
Length = 1379
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 330 SSRDGQRKGDRAHGPQENSTNEPRADATAGRGTEAELGRLP 452
+ +D QR R HG +E ++++ G E RLP
Sbjct: 573 TEKDSQRGDKRTHGAEEGRPYTSEMNSSSALGKEEHKKRLP 613
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 282 STTRTVQERLRSGTRVSSRDGQRKGDRAHGPQENSTNEPRADATAGRGT 428
S + VQE +SG G K ++ P ++T+ A +T G+ T
Sbjct: 1744 SAQKLVQEVSKSGQSCPGNVGDEKVQKSKKPTPDNTSGEEAHSTTGKPT 1792
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 218 APVRGPQAPRSASQCWEFRDSSLPWPC 138
A VR PQ R QC DSS+ W C
Sbjct: 697 ARVRDPQRGRWPEQCNRGWDSSVTWRC 723
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,139,936
Number of Sequences: 37544
Number of extensions: 189753
Number of successful extensions: 824
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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