Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021284
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 32 0.18
X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic int... 31 0.41
U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate fi... 31 0.41
U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate fi... 31 0.41
Z78545-1|CAB01765.1| 150|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical pr... 30 0.72
Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical p... 30 0.72
AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical ... 30 0.72
Z78198-9|CAE17828.1| 164|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical ... 29 1.3
AC006722-2|AAK68422.1| 296|Caenorhabditis elegans Hypothetical ... 29 1.3
AC006645-7|AAF39840.1| 296|Caenorhabditis elegans Hypothetical ... 29 1.3
Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 2.2
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 2.2
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 2.2
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 28 2.9
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 28 2.9
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 28 2.9
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 28 2.9
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 28 2.9
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 3.8
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 3.8
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 3.8
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 3.8
U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z93388-3|CAB07655.1| 230|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical pr... 27 6.7
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 27 6.7
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 27 6.7
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 27 8.9
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 27 8.9
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 27 8.9
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 27 8.9
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 32.3 bits (70), Expect = 0.18
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 268 TELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLN 438
TE A EL E+E ++E+ KE + + + ++R EL + +E++R+N
Sbjct: 151 TEATTAVAELQAKLQTVEKEHKKEIEDAKEALAAEKQNSEREKMELKKLTEELQRMN 207
>X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic
intermediate filamentprotein protein.
Length = 543
Score = 31.1 bits (67), Expect = 0.41
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 292 ELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVR-RLNSDVYQ 453
E + + E E++ Q++ S E ++ +R+ + N+EL +LD +R L +D+ Q
Sbjct: 30 EEFVASAEREKQEMQQLNSRLEVYISRVRQLEDRNKELVIELDTLRGSLGNDIGQ 84
>U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate
filament, b protein2, isoform c protein.
Length = 526
Score = 31.1 bits (67), Expect = 0.41
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 292 ELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVR-RLNSDVYQ 453
E + + E E++ Q++ S E ++ +R+ + N+EL +LD +R L +D+ Q
Sbjct: 30 EEFVASAEREKQEMQQLNSRLEVYISRVRQLEDRNKELVIELDTLRGSLGNDIGQ 84
>U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate
filament, b protein2, isoform a protein.
Length = 543
Score = 31.1 bits (67), Expect = 0.41
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 292 ELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVR-RLNSDVYQ 453
E + + E E++ Q++ S E ++ +R+ + N+EL +LD +R L +D+ Q
Sbjct: 30 EEFVASAEREKQEMQQLNSRLEVYISRVRQLEDRNKELVIELDTLRGSLGNDIGQ 84
>Z78545-1|CAB01765.1| 150|Caenorhabditis elegans Hypothetical
protein M03B6.1 protein.
Length = 150
Score = 30.7 bits (66), Expect = 0.54
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 122 SNILDSKAKEAKNPGTPNIEMLTSALVARGQELQMLK-VEIDKLKGRK 262
++I + + K+A++ N+++ L A+ +ELQ LK +E K+K RK
Sbjct: 25 TSIAEKERKQAEDFINDNLDVPLEELAAQNKELQRLKIIEYHKMKARK 72
>Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 30.3 bits (65), Expect = 0.72
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 237 RSIS*RGERGHGAFESTTRTVQERLRSGTRVSSRDGQRKGDRAHGPQENSTNEPRADATA 416
R IS GE +G FE + R ++ + S D + ++ PQ+ +TN PR T
Sbjct: 287 RVISVGGE-DNGGFEEEEKAPSSRRKTTPKPSGSDYDYENEK---PQQKTTNAPRRSTTV 342
Query: 417 GRGTEAELGRLPEGHS 464
R + + P+ HS
Sbjct: 343 SRDYDYD-NESPKLHS 357
>Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 30.3 bits (65), Expect = 0.72
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 237 RSIS*RGERGHGAFESTTRTVQERLRSGTRVSSRDGQRKGDRAHGPQENSTNEPRADATA 416
R IS GE +G FE + R ++ + S D + ++ PQ+ +TN PR T
Sbjct: 287 RVISVGGE-DNGGFEEEEKAPSSRRKTTPKPSGSDYDYENEK---PQQKTTNAPRRSTTV 342
Query: 417 GRGTEAELGRLPEGHS 464
R + + P+ HS
Sbjct: 343 SRDYDYD-NESPKLHS 357
>AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.5 protein.
Length = 292
Score = 30.3 bits (65), Expect = 0.72
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 2 LRAGLAELKQQLEKQHSAVLSNIGQVRGTLSIFEGIFKDCSNILDSKAKEAKN 160
L + AEL++ L+++ + SNI + + S+ EG K +L+ K KE K+
Sbjct: 155 LTSRAAELRRILKRRVMHIQSNILKYKSETSVIEGAEKINEQLLNMKLKEIKD 207
>Z78198-9|CAE17828.1| 164|Caenorhabditis elegans Hypothetical
protein F55C5.10 protein.
Length = 164
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +1
Query: 271 ELLKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRL 435
+LL Q + S+ + RQE A +K + LRK +++++ ++L E++RL
Sbjct: 101 DLLVHQNQKLASEKHELKVERQEFAEKKHEMAKRLRKQRKISEYYRRKLVEIQRL 155
>AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical
protein F33E11.3 protein.
Length = 651
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 289 LELYKSDFEAERESRQEMASEK--ETVLTDLRKTQRMNQELTQQLDEVRR 432
L Y+ +FE R E+ASE+ + VL +L + N L +L+ VRR
Sbjct: 564 LRFYEIEFEILL--RHELASEEHLKQVLDELESVSKQNHRLEDELESVRR 611
>AC006722-2|AAK68422.1| 296|Caenorhabditis elegans Hypothetical
protein Y19D10A.9 protein.
Length = 296
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 357 DRAHGPQENSTNEPRADATAGRGTEAELGRLPEGHSE 467
D +GP +T+EP +DAT T+ P G S+
Sbjct: 157 DFTNGPASGATDEPISDATGAYSTDLPFSDSPTGASD 193
>AC006645-7|AAF39840.1| 296|Caenorhabditis elegans Hypothetical
protein F56A4.2 protein.
Length = 296
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 357 DRAHGPQENSTNEPRADATAGRGTEAELGRLPEGHSE 467
D +GP +T+EP +DAT T+ P G S+
Sbjct: 157 DFTNGPASGATDEPISDATGAYSTDLPFSDSPTGASD 193
>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical
protein M110.4b protein.
Length = 1155
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 295 VRVVLSKAPCPLSPLQLID 239
+ V S+ PCPLSP QL D
Sbjct: 397 IEKVFSRTPCPLSPAQLAD 415
>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical
protein M110.4a protein.
Length = 1156
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 295 VRVVLSKAPCPLSPLQLID 239
+ V S+ PCPLSP QL D
Sbjct: 397 IEKVFSRTPCPLSPAQLAD 415
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 277 LKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEV 426
L+ Q++ + + + E+ SR ++ K V DL+ Q E+T+Q +V
Sbjct: 1040 LEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENIDEITKQKHDV 1089
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 277 LKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEV 426
L+ Q++ + + + E+ SR ++ K V DL+ Q E+T+Q +V
Sbjct: 1040 LEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENIDEITKQKHDV 1089
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +1
Query: 277 LKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLNSDVYQR 456
L+ +LE +S+ E + +++ + E + TDL + +NQ+ + + R N D +
Sbjct: 1735 LEEELEEEQSNCELAIDKQRKAQVQLEQITTDLSMERTLNQKTEAEKQSLERSNRDYKAK 1794
Query: 457 AT 462
T
Sbjct: 1795 IT 1796
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 288 TRTVQERLRSGTRVSSRDGQR-KGDRAHGPQENSTNEPRADATAGRGTEAELGRLPEG 458
+R+ ++R R RD R +GDR ++ + R D A + AE+G++ +G
Sbjct: 182 SRSREDRRDRDRRDRDRDRDRGRGDRRGDDRQRDRRDRRDDGGARKSEVAEIGKIYDG 239
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 288 TRTVQERLRSGTRVSSRDGQR-KGDRAHGPQENSTNEPRADATAGRGTEAELGRLPEG 458
+R+ ++R R RD R +GDR ++ + R D A + AE+G++ +G
Sbjct: 182 SRSREDRRDRDRRDRDRDRDRGRGDRRGDDRQRDRRDRRDDGGARKSEVAEIGKIYDG 239
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/48 (20%), Positives = 25/48 (52%)
Frame = +1
Query: 313 EAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLNSDVYQR 456
E E+++ QE+ ++ + K + N+ L + +D + N D+ ++
Sbjct: 170 EVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRK 217
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/48 (20%), Positives = 25/48 (52%)
Frame = +1
Query: 313 EAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLNSDVYQR 456
E E+++ QE+ ++ + K + N+ L + +D + N D+ ++
Sbjct: 170 EVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRK 217
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/48 (20%), Positives = 25/48 (52%)
Frame = +1
Query: 313 EAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVRRLNSDVYQR 456
E E+++ QE+ ++ + K + N+ L + +D + N D+ ++
Sbjct: 170 EVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRK 217
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 2 LRAGLAELKQQLEKQHSAVLSNIGQVRGTLSIFEGIFKDCSNILDSKAKEAKNPGTPN 175
LR+ LA + +LE+Q + ++R + FE + +N+ S + +NP + N
Sbjct: 1210 LRSDLATVTLKLERQELKAKDSDNRLRDSQKRFEEVQSKLANLQKSAVESLQNPMSSN 1267
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 2 LRAGLAELKQQLEKQHSAVLSNIGQVRGTLSIFEGIFKDCSNILDSKAKEAKNPGTPN 175
LR+ LA + +LE+Q + ++R + FE + +N+ S + +NP + N
Sbjct: 1210 LRSDLATVTLKLERQELKAKDSDNRLRDSQKRFEEVQSKLANLQKSAVESLQNPMSSN 1267
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 2 LRAGLAELKQQLEKQHSAVLSNIGQVRGTLSIFEGIFKDCSNILDSKAKEAKNPGTPN 175
LR+ LA + +LE+Q + ++R + FE + +N+ S + +NP + N
Sbjct: 970 LRSDLATVTLKLERQELKAKDSDNRLRDSQKRFEEVQSKLANLQKSAVESLQNPMSSN 1027
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 2 LRAGLAELKQQLEKQHSAVLSNIGQVRGTLSIFEGIFKDCSNILDSKAKEAKNPGTPN 175
LR+ LA + +LE+Q + ++R + FE + +N+ S + +NP + N
Sbjct: 1210 LRSDLATVTLKLERQELKAKDSDNRLRDSQKRFEEVQSKLANLQKSAVESLQNPMSSN 1267
>U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical
protein R12C12.5 protein.
Length = 236
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 259 KEDTELLKAQLELYKSDFEAERESRQE-MASEKETVLTDLRKTQRMNQELTQ 411
++ ELL + E ++ E E ES ++ M + K+ L LRK + QEL++
Sbjct: 44 RDAEELLIKKQEYFELRIEQEVESAKKYMKTNKKMALAALRKKKHYEQELSR 95
>Z93388-3|CAB07655.1| 230|Caenorhabditis elegans Hypothetical
protein T10C6.5 protein.
Length = 230
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 259 KEDTELLKAQLELYKSDFEAERESRQEMASEKE 357
++DT L A+LE K + E+ +R E EKE
Sbjct: 122 EDDTAALMAELEKIKKERAEEKAARDEEIKEKE 154
>Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical
protein F28D1.2 protein.
Length = 268
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = +2
Query: 14 LAELKQQLEKQHSAVLSNIGQVRGTLSIFEGIFKDCSNILDSKAKEAKNPGTPNIEMLTS 193
+A L + + ++ + N+ T EG+ + N LDS A+E+K T IE LT
Sbjct: 111 VANLGESTDPENEKRIKNLMPAAKTGIPPEGVLRLTINALDSAARESKKK-TMAIESLTK 169
Query: 194 ALVARGQELQMLKVEIDKLKGRKR 265
+ + ++ +++L+ + R
Sbjct: 170 QVDDANKLTEVYMKRLEELEDKHR 193
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 277 LKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVR 429
LK ++ KSD +R++ + ++ + L + ++ + +L QQL+E R
Sbjct: 246 LKLIIDSLKSDVTNKRDTAKSSQQREQELSNILEEKEKESAQLLQQLEESR 296
>Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical
protein C54D10.8 protein.
Length = 316
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 286 QLELYKSDFEAERESRQEMASEKETVLTDLRKT-QRMNQELTQQLDEVRRL 435
+LE+ + E +E +E+ + L +LR+ Q+ QE+ +Q++ +RRL
Sbjct: 132 KLEILAQE-ERAQERLREIEDQLARDLEELRRCDQQRRQEMNEQMENIRRL 181
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 301 KSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDE 423
KSD AE E ++ + EKE + + +K +E+ ++L+E
Sbjct: 942 KSDELAEIERKRRESEEKERLEIEAKKEAERQREIKRKLEE 982
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 312 RSGTRVSSRDGQRKGDRAHGPQENSTNEP 398
R G R RDG +G G + NS NEP
Sbjct: 855 RGGGRGRERDGGSRGRGGRGGRGNSGNEP 883
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 277 LKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVR 429
+K+QLE K++ E S +E E E + + + T + ELT + +R
Sbjct: 781 VKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVTATTQERDELTATSESLR 831
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 277 LKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVR 429
+K+QLE K++ E S +E E E + + + T + ELT + +R
Sbjct: 783 VKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVTATTQERDELTATSESLR 833
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/82 (19%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 GLAELKQQLEKQHSAVLSNIGQVRGTLSIFEGIFKDCSNILDSKAKEAKNPGTP--NIEM 184
G +LKQ+LEK+ L+++ ++R E + ++++ + ++ + T + EM
Sbjct: 356 GFDKLKQELEKERDDALADVQKIREVKRNVERELQSLTSLMAERDEQIEELKTKMFSFEM 415
Query: 185 LTSALVARGQELQMLKVEIDKL 250
+ + EL + ++D++
Sbjct: 416 IKKDHESAKNELSRTQEKLDQM 437
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 277 LKAQLELYKSDFEAERESRQEMASEKETVLTDLRKTQRMNQELTQQLDEVR 429
+K+QLE K++ E S +E E E + + + T + ELT + +R
Sbjct: 783 VKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVTATTQERDELTATSESLR 833
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 26.6 bits (56), Expect = 8.9
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 280 KAQLELYKSDFEAERESRQE---MASEKETVLTDLRKTQRMNQELTQQLDEVRRLNSDVY 450
+A+LE Y+ +ERE +E EK+ R+ + ++LDE RR +
Sbjct: 63 QAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREAAERKRLDEERRQKEEQE 122
Query: 451 QRATA 465
+RA A
Sbjct: 123 RRARA 127
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 26.6 bits (56), Expect = 8.9
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 280 KAQLELYKSDFEAERESRQE---MASEKETVLTDLRKTQRMNQELTQQLDEVRRLNSDVY 450
+A+LE Y+ +ERE +E EK+ R+ + ++LDE RR +
Sbjct: 63 QAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREAAERKRLDEERRQKEEQE 122
Query: 451 QRATA 465
+RA A
Sbjct: 123 RRARA 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,250,509
Number of Sequences: 27780
Number of extensions: 150728
Number of successful extensions: 820
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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