Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021284
         (469 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.0  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   8.7  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 128 ILDSKAKEAKNPGTPNIEMLTSALVARGQELQMLKVEIDKL 250
           +L S+  EA    T N+E+LT  L    +EL   K + D+L
Sbjct: 343 VLMSEQFEADYKLTRNLELLTDKLQQTYRELDGEKQKTDRL 383


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 128 ILDSKAKEAKNPGTPNIEMLTSALVARGQELQMLKVEIDKL 250
           +L S+  EA    T N+E+LT  L    +EL   K + D+L
Sbjct: 343 VLMSEQFEADYKLTRNLELLTDKLQQTYRELDGEKQKTDRL 383


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 233 LSASAAPVRGPQAPRSASQC 174
           L  ++ P R P +   ASQC
Sbjct: 673 LHLTSPPARSPSSQAQASQC 692



 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = -3

Query: 230 SASAAPVRGPQAPRSASQCWEFRDSSLPWP 141
           S +    R PQ  +   QC     S+  WP
Sbjct: 753 STTTITARSPQGSQGLLQCATSNYSTTRWP 782


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +3

Query: 195 RLWPADRSCRC 227
           ++W  +RSC C
Sbjct: 67  KIWQMERSCMC 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,618
Number of Sequences: 438
Number of extensions: 2000
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)