Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021283
(749 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 26 0.28
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.85
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.85
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.85
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.85
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.85
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.85
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 0.85
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.85
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 23 3.4
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 8.0
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.28
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 319 RVTPPMSMFSTASATVTSGLDTSGRTGTGYRPPRLSSRTSDVSCLPGQS 173
R TPP+S S ++AT +SGL + T +S TS P S
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASS 172
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 319 RVTPPMSMFSTASATVTSGL 260
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 319 RVTPPMSMFSTASATVTSGL 260
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 319 RVTPPMSMFSTASATVTSGL 260
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 319 RVTPPMSMFSTASATVTSGL 260
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 319 RVTPPMSMFSTASATVTSGL 260
R TPP+S S ++AT +SGL
Sbjct: 80 RSTPPLSTPSNSNATKSSGL 99
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 319 RVTPPMSMFSTASATVTSGL 260
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 319 RVTPPMSMFSTASATVTSGL 260
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 319 RVTPPMSMFSTASATVTSGL 260
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 502 LPQQYSPGQAQLTLRYGMNPHQK-PAQVFTTRD 597
LP++Y P Q+ R+G ++K P + T D
Sbjct: 35 LPERYKPIGVQIANRFGEQANEKIPLKDITPPD 67
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 592 RDSLPITTLNGAPGFINLCDA 654
R S P +T +G+PGF+ A
Sbjct: 71 RISSPSSTKSGSPGFLTYTKA 91
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,338
Number of Sequences: 336
Number of extensions: 3534
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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