Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021283
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    26   1.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   3.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   3.3  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    24   5.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.8  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   7.6  

>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 659 FSASHRLINPGAPFSVVIGKLSLVVNTW 576
           +SA H++   GAP   ++G LSLVV  +
Sbjct: 37  WSAIHKMQVRGAPAIAIVGCLSLVVEIY 64


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/56 (19%), Positives = 23/56 (41%)
 Frame = -3

Query: 714  SRSREAQRFLQLLDELPGVQRVAQVDKSRRTVQCRDRQAVSGREYLGRLLMWVHTV 547
            S +    RF  ++ ELP       V +    ++CR+  +         +++W  T+
Sbjct: 865  SEAGHPYRFQPIVPELPTTTTTMDVSRCSPKLECRESSSSPTARQQQNVVLWPDTI 920


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/56 (19%), Positives = 23/56 (41%)
 Frame = -3

Query: 714  SRSREAQRFLQLLDELPGVQRVAQVDKSRRTVQCRDRQAVSGREYLGRLLMWVHTV 547
            S +    RF  ++ ELP       V +    ++CR+  +         +++W  T+
Sbjct: 864  SEAGHPYRFQPIVPELPTTTTTMDVSRCSPKLECRESSSSPTARQQQNVVLWPDTI 919


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 622 GAPGFINLCDALNAWQLVKELKEA 693
           G+PGF+ L   LN   LV +LK A
Sbjct: 75  GSPGFVGLYIFLNPVLLVTDLKLA 98


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 15  AVDCQWRYRQVASERRPHSSRCV 83
           A D QW  R +AS +RP + R V
Sbjct: 801 ATDRQWCQRMLASFQRPLAQRVV 823


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = +3

Query: 237 VPVRPDVSKPDVTVADAVENIDIGGVTLLRA-QPRTTTGSPSS 362
           VPVRP    PD  V   ++    GG  + RA      TG P S
Sbjct: 137 VPVRPSACTPDSRVGGYID--ASGGSPVSRAGSAAAATGVPGS 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,053
Number of Sequences: 2352
Number of extensions: 15413
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)