Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021283
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 118 3e-27
U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical pr... 107 1e-23
U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 31 1.2
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 31 1.2
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 31 1.2
U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 28 6.2
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 28 6.2
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 28 6.2
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 28 6.2
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 28 6.2
U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical pr... 28 8.1
L16559-10|AAA27927.1| 371|Caenorhabditis elegans Hypothetical p... 28 8.1
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 118 bits (285), Expect = 3e-27
Identities = 52/82 (63%), Positives = 69/82 (84%)
Frame = +1
Query: 10 GLQLIASGGTARSLRNAGLTVQDVSDITRAPEMLGGRVKTLHPAVHAGILARLSDSDQED 189
GL LIASGGTA+++R+ G+ V DV+D+T+ PEMLGGRVKTLHPAVH GILAR ++SD++D
Sbjct: 29 GLTLIASGGTAKAIRDQGIDVHDVADVTKFPEMLGGRVKTLHPAVHGGILARDTESDRKD 88
Query: 190 MKRQKYEMISVVVCNLYPFVQT 255
+++ +SVVVCNLYPF +T
Sbjct: 89 LEKHNISFVSVVVCNLYPFKKT 110
Score = 107 bits (256), Expect = 1e-23
Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = +1
Query: 523 GQAQLTLRYGMNPHQKP-AQVFTTRDSLPITTLNGAPGFINLCDALNAWQLVKELKEALS 699
G+ L LRYG NPHQK A+++ D +PI LNG+PG+IN+ D LN WQLVKEL +A
Sbjct: 199 GERALPLRYGTNPHQKDDAELYIVEDEMPIKVLNGSPGYINILDGLNGWQLVKELSDATK 258
Query: 700 LPAAASFKHVSPAGAA 747
+PAAASFKHVSPAGAA
Sbjct: 259 MPAAASFKHVSPAGAA 274
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +2
Query: 332 AKNHDRVTVVCDPADYDAVVKEIKENKHHQTTLGTRQRLALKAFTHTSDYDLAISDYFR 508
AKNH+RV+V+CDPADYD ++ E+K TT RQ LALKAF HT+ YD +IS + R
Sbjct: 137 AKNHERVSVICDPADYDHIISELKSG---GTTRERRQLLALKAFEHTTSYDESISGFMR 192
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 240 PVRPDVSKPDVTVADAVENIDIGGVTLLRA 329
P + V D +V +AVENIDIGGVTLLRA
Sbjct: 106 PFKKTVQSKDCSVEEAVENIDIGGVTLLRA 135
>U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical
protein C55F2.1c protein.
Length = 393
Score = 107 bits (256), Expect = 1e-23
Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = +1
Query: 523 GQAQLTLRYGMNPHQKP-AQVFTTRDSLPITTLNGAPGFINLCDALNAWQLVKELKEALS 699
G+ L LRYG NPHQK A+++ D +PI LNG+PG+IN+ D LN WQLVKEL +A
Sbjct: 69 GERALPLRYGTNPHQKDDAELYIVEDEMPIKVLNGSPGYINILDGLNGWQLVKELSDATK 128
Query: 700 LPAAASFKHVSPAGAA 747
+PAAASFKHVSPAGAA
Sbjct: 129 MPAAASFKHVSPAGAA 144
>U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical
protein C55F2.1a protein.
Length = 420
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +1
Query: 601 LPITTLNGAPGFINLCDALNAWQLVKELKEALSLPAAASFKHVSPAGAA 747
+PI LNG+PG+IN+ D LN WQLVKEL +A +PAAASFKHVSPAGAA
Sbjct: 1 MPIKVLNGSPGYINILDGLNGWQLVKELSDATKMPAAASFKHVSPAGAA 49
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -3
Query: 729 HVLEASRSREAQRFLQLLDELPGVQRVAQVDKSRRTVQCRDRQAVSGREYLGRLLMWVH 553
H +R +E + +LL Q + +VD R +QC R + RLL W+H
Sbjct: 1989 HRARLNRCQEIETATRLLCAAEFRQDLDRVDYIRSAIQCEYRLETPDSDISQRLLQWIH 2047
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -3
Query: 729 HVLEASRSREAQRFLQLLDELPGVQRVAQVDKSRRTVQCRDRQAVSGREYLGRLLMWVH 553
H +R +E + +LL Q + +VD R +QC R + RLL W+H
Sbjct: 2027 HRARLNRCQEIETATRLLCAAEFRQDLDRVDYIRSAIQCEYRLETPDSDISQRLLQWIH 2085
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -3
Query: 729 HVLEASRSREAQRFLQLLDELPGVQRVAQVDKSRRTVQCRDRQAVSGREYLGRLLMWVH 553
H +R +E + +LL Q + +VD R +QC R + RLL W+H
Sbjct: 1989 HRARLNRCQEIETATRLLCAAEFRQDLDRVDYIRSAIQCEYRLETPDSDISQRLLQWIH 2047
>U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical
protein F13H8.5 protein.
Length = 513
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 234 PVPVRPDVSKPDVTVADAVENIDIGGVTLLRAQPRTTTGSPSSVT 368
PVP PDV+ V A +V+ +D L R QP + T + +T
Sbjct: 168 PVPQVPDVAFQHVNTARSVQQVDFDN-KLFREQPNSFTQNQEKIT 211
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 502 LPQQYSPGQAQLTLRYGMNPHQKPAQVFTTRDSLPITTLNGAP 630
LP Y+ LR +P +KP+ TT L + TLNG+P
Sbjct: 246 LPSSYASSALPTPLRE--SPERKPSFQDTTSTPLSLLTLNGSP 286
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 502 LPQQYSPGQAQLTLRYGMNPHQKPAQVFTTRDSLPITTLNGAP 630
LP Y+ LR +P +KP+ TT L + TLNG+P
Sbjct: 248 LPSSYASSALPTPLRE--SPERKPSFQDTTSTPLSLLTLNGSP 288
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 502 LPQQYSPGQAQLTLRYGMNPHQKPAQVFTTRDSLPITTLNGAP 630
LP Y+ LR +P +KP+ TT L + TLNG+P
Sbjct: 246 LPSSYASSALPTPLRE--SPERKPSFQDTTSTPLSLLTLNGSP 286
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 124 KTLHPAVHAGIL-ARLSDSDQEDMK 195
K+LHP+VHA +L +SD D ED++
Sbjct: 996 KSLHPSVHALVLEPMMSDPDGEDVE 1020
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 124 KTLHPAVHAGIL-ARLSDSDQEDMK 195
K+LHP+VHA +L +SD D ED++
Sbjct: 1081 KSLHPSVHALVLEPMMSDPDGEDVE 1105
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 421 DDFGHKAEISPEGVHSYFGL*PRHIGLLPQQY 516
D FG+ A P GV S FG+ R+I LPQ Y
Sbjct: 421 DTFGYSA---PTGVISSFGISLRNINRLPQPY 449
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 421 DDFGHKAEISPEGVHSYFGL*PRHIGLLPQQY 516
D FG+ A P GV S FG+ R+I LPQ Y
Sbjct: 421 DTFGYSA---PTGVISSFGISLRNINRLPQPY 449
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 223 PRLSSRTSDVSCLPGQSRIIELRSQHVPLDVKFSPDLRASPVLS*CPTHLEL*GRRS 53
P S+ T+DVS + R IE + D + + D+ ++P+L+ H++L GR S
Sbjct: 591 PETSTATTDVSQMTTTPRSIETTTPSTSNDTESNQDVISTPLLAWRQGHIDL-GRIS 646
>U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical
protein F25B4.5 protein.
Length = 710
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 154 ILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTY 258
ILA++ SD D R+KY N Y F Q Y
Sbjct: 105 ILAKVDQSDDVDFAREKYRSFLSRYPNCYGFWQKY 139
>L16559-10|AAA27927.1| 371|Caenorhabditis elegans Hypothetical
protein C06E1.11 protein.
Length = 371
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 386 VVKEIKENKHHQTTLGTRQRLALKAFTHTS 475
V KE+K++ HH TT T + +A A T+ S
Sbjct: 69 VGKEVKKDYHHGTTRNTIKTVATTATTYAS 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,572,178
Number of Sequences: 27780
Number of extensions: 348394
Number of successful extensions: 1104
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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