Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021283
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.3  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 274 VTSGLDTSGRTGTGYRP-PRLSSRTSDVS 191
           +T+G+D      +GYRP PR+S   + V+
Sbjct: 539 MTAGIDPKSIFNSGYRPKPRMSGPVAAVA 567


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 97  APEMLGGRVKTLHPAV 144
           AP MLGGR  T +  V
Sbjct: 340 APHMLGGRTDTTYRVV 355


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 560 GFIPYLKVSWACPGEYCCGSSPI 492
           G +P L + W+ PGE   GSS +
Sbjct: 610 GDLP-LNIRWSYPGEEMGGSSGV 631


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 582 YLGRLLMWVHTVS*GQ 535
           Y G +  W HTVS G+
Sbjct: 8   YYGDVYQWNHTVSSGE 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,537
Number of Sequences: 438
Number of extensions: 3821
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)