Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021282
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    28   0.095
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    26   0.38 
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    26   0.38 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.67 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.67 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.88 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   3.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.6  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   4.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   6.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.2  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
            protein.
          Length = 947

 Score = 27.9 bits (59), Expect = 0.095
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
 Frame = -2

Query: 298  PNICTLDMEERCACKLVTGDRTCWR------AWITFTLNASTALRPISSR*TLEI 152
            P+I +L   +   CK   G  TCWR          F +  S+ALRP S   T  +
Sbjct: 863  PSIVSLGEYKCVTCKCENGKPTCWRECDKATCEKLFRMKKSSALRPASGGTTARV 917


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -1

Query: 770 GFHHDFIIDPKLALWHPGQI*LHDHFPSH 684
           G+H    + P+  +W P     H H P H
Sbjct: 31  GYHQGAQMGPEQQMWEPQMWHHHSHMPPH 59


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -1

Query: 770 GFHHDFIIDPKLALWHPGQI*LHDHFPSH 684
           G+H    + P+  +W P     H H P H
Sbjct: 31  GYHQGAQMGPEQQMWEPQMWHHHSHMPPH 59


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 364 NDLQQELKYHGRVHILLCDCC 302
           +DLQQ+L+Y   V   L  CC
Sbjct: 82  SDLQQKLRYFEEVFSSLLSCC 102


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 364 NDLQQELKYHGRVHILLCDCC 302
           +DLQQ+L+Y   V   L  CC
Sbjct: 82  SDLQQKLRYFEEVFSSLLSCC 102


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +2

Query: 188 CCGRIQSEC--DPCSPAGAITCYQL 256
           C G I +EC  +PCS AG + C QL
Sbjct: 295 CEGDI-NECLSNPCSNAGTLDCVQL 318


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 395 SEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTF 502
           +   IKN + LI E  +  +DF   +  D  + + F
Sbjct: 96  TSSKIKNMYSLISECAENFVDFFQGREQDVEIKEVF 131


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 640 HTLVHQGTARFVCT*CLHGASQSDQL 563
           H   H G  RF C  C     +SD L
Sbjct: 365 HLRTHTGEKRFACPICNKRFMRSDHL 390


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 640 HTLVHQGTARFVCT*CLHGASQSDQL 563
           H  +H G   + C  CL   SQS  L
Sbjct: 96  HLRIHSGEKPYECKLCLLRFSQSGNL 121


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 640 HTLVHQGTARFVCT*CLHGASQSDQL 563
           H  +H G   + C  CL   SQS  L
Sbjct: 352 HLRIHSGEKPYECKLCLLRFSQSGNL 377


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 203  ECVHSITTNIISVDSRDQHLAFMVINEQA 117
            E +H I TN   +  + +  +  ++NE+A
Sbjct: 941  ELIHKIATNDHEIIDKIEMFSLQILNERA 969



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 203 ECVHSITTNIISVDSRDQHLAFMVINEQA 117
           E +H I TN   +  + +  +  ++NE+A
Sbjct: 665 ELIHKIETNDHEIIDKIEMFSLQILNERA 693



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 203  ECVHSITTNIISVDSRDQHLAFMVINEQA 117
            E +H I TN   +  + +  +  ++NE+A
Sbjct: 1043 ELIHKIETNEHEIIDKIEMFSLQILNERA 1071


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 448 DLGLWLPSEF*YWGPEDI 501
           D+ ++LP  F ++ PEDI
Sbjct: 489 DVKIFLPFRFLFYKPEDI 506


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 613 ELFLDVLEYVNLLMSPQVKCSLLTW--LGKW 699
           ELF  +L +++  ++  + C+  TW  L +W
Sbjct: 137 ELFFVILLWISFFLNFMLHCNNTTWRCLYRW 167


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 203 ECVHSITTNIISVDSRDQHLAFMVINEQA 117
           E +H I TN   +  + +  +  ++NE+A
Sbjct: 324 ELIHKIETNEHEIIDKIEMFSLQILNERA 352


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 625 DVLEYVNLLMSPQVKCSLL 681
           DV+E V+ L++P +  SLL
Sbjct: 372 DVIEIVDKLLNPDLGLSLL 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,681
Number of Sequences: 336
Number of extensions: 4208
Number of successful extensions: 26
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)