Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021281
(586 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 113 4e-24
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 109 6e-23
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 108 8e-23
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 103 4e-21
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 103 4e-21
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 98 2e-19
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 95 8e-19
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 94 3e-18
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 91 1e-17
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 90 4e-17
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 89 5e-17
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 89 9e-17
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 85 9e-16
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 85 1e-15
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 77 3e-13
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 69 6e-11
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 68 1e-10
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 50 5e-05
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 47 4e-04
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.014
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 40 0.033
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 38 0.13
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 37 0.30
UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2; ... 36 0.70
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.70
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 36 0.93
UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;... 36 0.93
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.93
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 35 1.2
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 1.6
UniRef50_Q7QP39 Cluster: GLP_193_15365_14421; n=2; Giardia lambl... 35 1.6
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 35 1.6
UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole ge... 34 2.2
UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q1DCK1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;... 33 3.8
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 33 3.8
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 5.0
UniRef50_UPI0000DB70F4 Cluster: PREDICTED: similar to scribbler ... 33 5.0
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 33 5.0
UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep... 33 6.6
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sa... 33 6.6
UniRef50_O46169 Cluster: Orthodenticle-1 protein; n=1; Tribolium... 33 6.6
UniRef50_UPI0000F2C320 Cluster: PREDICTED: hypothetical protein;... 32 8.7
UniRef50_Q82N62 Cluster: Putative phosphotriesterase-family prot... 32 8.7
UniRef50_Q3WJC1 Cluster: High-affinity nickel-transporter precur... 32 8.7
UniRef50_A0HKX9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q4PF49 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 32 8.7
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 113 bits (271), Expect = 4e-24
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 7e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 32.3 bits (70), Expect = 8.7
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPGFP 516
++AA+ +PALV ++GH IE++P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 109 bits (261), Expect = 6e-23
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 67 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 83.8 bits (198), Expect = 3e-15
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +3
Query: 57 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 236
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 237 AGHQTS 254
AGHQTS
Sbjct: 61 AGHQTS 66
Score = 40.3 bits (90), Expect = 0.033
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +3
Query: 504 SRLPLVVADKFQEINKTKHAVIFLRRL 584
S PLVV+D+ Q++ KTK AVIFLRRL
Sbjct: 151 SEFPLVVSDEVQKVQKTKQAVIFLRRL 177
Score = 38.3 bits (85), Expect = 0.13
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +1
Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516
L ++AA+GVPALVQ++GH+I+ + FP
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 108 bits (260), Expect = 8e-23
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 181 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 66.9 bits (156), Expect = 3e-10
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +3
Query: 90 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTS
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTS 180
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 103 bits (246), Expect = 4e-21
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 40 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 103 bits (246), Expect = 4e-21
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 63 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = +3
Query: 72 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 251
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 252 S 254
S
Sbjct: 62 S 62
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = +2
Query: 233 GGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
G +ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 55.6 bits (128), Expect = 8e-07
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 243 HQTS 254
++TS
Sbjct: 60 YETS 63
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 95.5 bits (227), Expect = 8e-19
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ + SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 HSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 66.1 bits (154), Expect = 6e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +3
Query: 72 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/64 (65%), Positives = 46/64 (71%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
+A + Q G + +ESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGMQ-HSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 389 RRWH 400
RRWH
Sbjct: 110 RRWH 113
Score = 58.8 bits (136), Expect = 9e-08
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPGFP 516
+VAATG+ LV ARGH I ++P P
Sbjct: 128 AVAATGIVPLVLARGHRISQVPQIP 152
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 91.5 bits (217), Expect = 1e-17
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
+A + + G+ + + SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGYQTS-ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 389 RRWH 400
RRWH
Sbjct: 108 RRWH 111
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = +3
Query: 75 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 89.8 bits (213), Expect = 4e-17
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ +ESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 63 HSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 243 HQTS 254
HQ S
Sbjct: 61 HQHS 64
Score = 35.5 bits (78), Expect = 0.93
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516
+ ++AATG P+LV ARGH I +P P
Sbjct: 125 VAAAIAATGCPSLVMARGHRINNVPELP 152
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 89.4 bits (212), Expect = 5e-17
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
+A + G+ + + SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGYQTS-ARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 389 RRWH 400
R WH
Sbjct: 108 RHWH 111
Score = 63.3 bits (147), Expect = 4e-09
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +3
Query: 69 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 249 TS 254
TS
Sbjct: 61 TS 62
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 88.6 bits (210), Expect = 9e-17
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 61 SWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 85.4 bits (202), Expect = 9e-16
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
+ +ESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 59 HSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 41.1 bits (92), Expect = 0.019
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = +3
Query: 84 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q S
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHS 60
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 85.0 bits (201), Expect = 1e-15
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ +ESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 62 HSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +3
Query: 81 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ S
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHS 63
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 77.0 bits (181), Expect = 3e-13
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 66 SWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +3
Query: 72 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 251
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 252 S 254
S
Sbjct: 63 S 63
Score = 33.1 bits (72), Expect = 5.0
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 445 VAATGVPALVQARGHIIEKIPGFPWL*PTNSK 540
+AA+ VPALV ARGH I +P P + NSK
Sbjct: 128 IAASAVPALVSARGHHIAGVPQIPLV--VNSK 157
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 69.3 bits (162), Expect = 6e-11
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
++SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 65 AKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 68.1 bits (159), Expect = 1e-10
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 63 SWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 41.9 bits (94), Expect = 0.011
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +3
Query: 69 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 249 TS 254
S
Sbjct: 59 VS 60
Score = 32.7 bits (71), Expect = 6.6
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 400 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPGFP 516
PSRQ A + ++AAT V LVQARGH++ ++ P
Sbjct: 113 PSRQRKFA---IASAIAATAVVPLVQARGHVLGEVKEVP 148
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 49.6 bits (113), Expect = 5e-05
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
+ SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 60 AHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +3
Query: 78 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQ 57
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +3
Query: 504 SRLPLVVADKFQEINKTKHAVIFLRRL 584
S +PLVV+DK QEINKTK AVIFLRR+
Sbjct: 13 SEIPLVVSDKIQEINKTKQAVIFLRRI 39
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.014
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 310 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 414
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 40.3 bits (90), Expect = 0.033
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 168 DLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
D+VN VH ++ KN QPY VS+ AG+QTS
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTS 53
Score = 38.7 bits (86), Expect = 0.100
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 185 SRFYVQELEAALLREQGGWSPNQSESWGTGRAVARIPRVRGGG 313
S + + + + E G+ + +ESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAGYQTS-AESWGTGRARGPMPRVRGGG 73
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 38.3 bits (85), Expect = 0.13
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 78 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TS
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTS 57
Score = 36.3 bits (80), Expect = 0.53
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 397
+ESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 58 AESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 37.1 bits (82), Expect = 0.30
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 230 QGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+G + ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
Score = 33.1 bits (72), Expect = 5.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPGFP 516
++AAT + V ARGH++EK+P P
Sbjct: 144 AIAATAYRSWVAARGHVVEKVPSLP 168
>UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 449
Score = 35.9 bits (79), Expect = 0.70
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 400 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIP-GFP 516
P+ P + +GG A GVPAL+ G +I +P GFP
Sbjct: 114 PAMSAPDVGTAIGGLAALPGVPALISGLGSLIPSVPAGFP 153
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 35.9 bits (79), Expect = 0.70
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 120 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 206
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 35.5 bits (78), Expect = 0.93
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 391
R QGG P ++ + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 539
Score = 35.5 bits (78), Expect = 0.93
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 367 VRPHEALAALAPSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPG 510
+RP + ALAP+ +PP S G A G P L+ A G +++ +PG
Sbjct: 151 LRPSSRIRALAPAPRPPLLPSAQG---APHGQPTLICAPGSLLQPLPG 195
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 0.93
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 284 ARIPRVRGGGTHRSGQGAFGNMCRGG 361
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 35.1 bits (77), Expect = 1.2
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 382
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 356 HDTCYRRHPDRTYEYHHHGHAEFGRQH 276
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_Q7QP39 Cluster: GLP_193_15365_14421; n=2; Giardia lamblia
ATCC 50803|Rep: GLP_193_15365_14421 - Giardia lamblia
ATCC 50803
Length = 314
Score = 34.7 bits (76), Expect = 1.6
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 415 PTAESGLGGSVAATGVPALVQARGHIIEKIPGFPWL*PTNSKRSTRPNMLS 567
P+ G+G V A GVP L+Q H K+ PTN+K RP++ S
Sbjct: 223 PSPSQGVGARVPAHGVPVLLQLHTHASRKLHSTA-CNPTNAKHVKRPSLPS 272
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 269 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 382
TG ARI R++GGG R G+ RGGR P K
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_126, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 2025
Score = 34.3 bits (75), Expect = 2.2
Identities = 29/88 (32%), Positives = 41/88 (46%)
Frame = +2
Query: 71 SPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPN 250
S VGV ++ G+ A P V+ A P G + + A+LR+ G SP+
Sbjct: 1937 STVVDVGVSKQ---GSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAGVLSPS 1993
Query: 251 QSESWGTGRAVARIPRVRGGGTHRSGQG 334
G GRA+ R VR GG R+G+G
Sbjct: 1994 VGR--GRGRAITRGRGVR-GGRGRAGRG 2018
>UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1491
Score = 34.3 bits (75), Expect = 2.2
Identities = 29/88 (32%), Positives = 41/88 (46%)
Frame = +2
Query: 71 SPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPN 250
S VGV ++ G+ A P V+ A P G + + A+LR+ G SP+
Sbjct: 1403 STVVDVGVSKQ---GSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAGVLSPS 1459
Query: 251 QSESWGTGRAVARIPRVRGGGTHRSGQG 334
G GRA+ R VR GG R+G+G
Sbjct: 1460 VGR--GRGRAITRGRGVR-GGRGRAGRG 1484
>UniRef50_Q1DCK1 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 1494
Score = 33.9 bits (74), Expect = 2.8
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 137 PVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPNQSESWGTGRAVARIPRVRG 307
PV V+ +GP SR+ V+ E ++ GGWSP Q + G A P V G
Sbjct: 946 PVLVEAGTAAGP---VSRYNVETQERWMVALSGGWSPGQEKGRGIYMVDAWSPEVNG 999
>UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 468
Score = 33.5 bits (73), Expect = 3.8
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = -3
Query: 458 PVAATLPPRPLSXXXXXXXXXXXXXASWGRTYVHHDTCYRRHPDRTYEYHHHG-HAEFGR 282
P+A +PP PL + R HH + HP + HHH ++ GR
Sbjct: 356 PIAFAVPPPPLHTSTTTKHNSWHSGVATSR---HHQ---QYHPPHHQQQHHHNKNSSQGR 409
Query: 281 QHVQYPM-IQTGLVTSLLAHAVGLPRVLGHRN 189
H P G TS + G PR + H N
Sbjct: 410 HHNNIPFRSHQGRNTSYNSSNYGKPRFIPHMN 441
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 33.5 bits (73), Expect = 3.8
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +1
Query: 271 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 435
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 436 GGSVAATGVPA 468
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.1 bits (72), Expect = 5.0
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 341 RRHPDRTYEYHHHGHAEFGRQHVQ-YP 264
R PD + +HHHGH G HV+ YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_UPI0000DB70F4 Cluster: PREDICTED: similar to scribbler
CG5580-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to scribbler CG5580-PA, isoform A -
Apis mellifera
Length = 1927
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 359 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQTGLVTSLLAHAVGLPRVLG 198
HH + HP + +HHH H +Q +Q GL +S L P G
Sbjct: 178 HHPHHHHPHPHHHHHHHHHHHHHHHQQQLQNSSTTNGLNSSNLIAVTTSPNGCG 231
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.1 bits (72), Expect = 5.0
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 364
RE GG + +SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGGA----QSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep:
AsmA precursor - Delftia acidovorans SPH-1
Length = 791
Score = 32.7 bits (71), Expect = 6.6
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +1
Query: 271 WTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSVA 450
WT RP S P W + + V W VR A L QPP+ + G V
Sbjct: 275 WTFKRPESTGPRWRFQVAQLSLRGGLVGWSDGVRQMAVRARLDSLVQPPSPDFPYGMRVG 334
Query: 451 ATG--VPALVQARGHI 492
TG A V+A+G I
Sbjct: 335 LTGRIAKATVEAQGLI 350
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 371 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 279
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0004B13.22
protein - Oryza sativa subsp. japonica (Rice)
Length = 248
Score = 32.7 bits (71), Expect = 6.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 393 VGTVASTSDSGERPWRQRCCYRRPSARS 476
+GT AS G+RPW R C+ R RS
Sbjct: 106 IGTAASIFSGGQRPWACRSCHLRGGCRS 133
>UniRef50_O46169 Cluster: Orthodenticle-1 protein; n=1; Tribolium
castaneum|Rep: Orthodenticle-1 protein - Tribolium
castaneum (Red flour beetle)
Length = 371
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 400 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPGFP 516
P P+ SGLGG ++ +PAL GH +E +P FP
Sbjct: 76 PYAPHPSLSSGLGGGLSGMPMPALGFGLGHPLESVP-FP 113
>UniRef50_UPI0000F2C320 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 250
Score = 32.3 bits (70), Expect = 8.7
Identities = 29/79 (36%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = +2
Query: 155 AHPSGPGQ*CSRFYVQELEAALLREQG-GWSPNQS----ESWGTGRAVARIPRV-RGGGT 316
A PS P + SR L A R QG G PN WG G++ R PR G GT
Sbjct: 55 APPSPPARGGSRHSAPALRACFRRAQGPGRGPNIGPGSWREWGVGQSPGRGPRAPAGAGT 114
Query: 317 HRSGQGAFGNMCRGGRMFA 373
G+ A R GR A
Sbjct: 115 --GGRAAVPGAGREGRPLA 131
>UniRef50_Q82N62 Cluster: Putative phosphotriesterase-family
protein; n=2; Streptomyces|Rep: Putative
phosphotriesterase-family protein - Streptomyces
avermitilis
Length = 303
Score = 32.3 bits (70), Expect = 8.7
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 PSGPGQ*CSRFYVQELEAALLREQGGWSPNQSESWGTGRAVARIPRV-RGGGTH 319
P PGQ E A REQGG S Q +G GR A +P + R G H
Sbjct: 31 PQLPGQELRDASAARAELAAFREQGGGSVVQWTPYGLGRRAADLPLLSRDTGVH 84
>UniRef50_Q3WJC1 Cluster: High-affinity nickel-transporter
precursor; n=1; Frankia sp. EAN1pec|Rep: High-affinity
nickel-transporter precursor - Frankia sp. EAN1pec
Length = 543
Score = 32.3 bits (70), Expect = 8.7
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 359 HHDTCYRRHPDRTYEY-HHHGHAEFGRQHVQYPMIQTGLVTSLLA 228
HHD P R + + H HGH+ GR HV P+ + SLLA
Sbjct: 402 HHD----HDPSRDHGHAHQHGHSHGGRWHVHPPVTDQPRLRSLLA 442
>UniRef50_A0HKX9 Cluster: Putative uncharacterized protein; n=1;
Comamonas testosteroni KF-1|Rep: Putative
uncharacterized protein - Comamonas testosteroni KF-1
Length = 585
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 374 GRTYVHHDTCYRRHPDRTYEYHH--HGHAEFGRQHVQYPMIQTGLVTSLLAHA 222
GR + HD +RH D + + H H H + G H+ + + TG+ HA
Sbjct: 311 GRKAIAHDDGEQRHADHIHGHGHKAHIHIDVGGGHIGHGLAHTGIRKHQTQHA 363
>UniRef50_Q4PF49 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 2303
Score = 32.3 bits (70), Expect = 8.7
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +1
Query: 373 PHEALAALAPSRQP---PTAESGLGGSVAATGVPALVQARGHIIEKIPGFPWL*PTNSKR 543
P E +A+ R P P A SG+G ++ PAL R ++PG P +
Sbjct: 1428 PEEVMASTHEDRTPTGKPRAVSGVGINLIPPTPPALESRRSFTSSQVPGTPSIAENEETA 1487
Query: 544 ST--RPNMLSSS 573
+T RP +LS S
Sbjct: 1488 TTHQRPPLLSRS 1499
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 32.3 bits (70), Expect = 8.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 135 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
LP +F P+R DL+ V ++ +S QP AG +TS
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTS 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,293,722
Number of Sequences: 1657284
Number of extensions: 12210961
Number of successful extensions: 43817
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 40328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43388
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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