Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021281
(586 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 107 8e-24
07_01_0578 + 4295386-4296489,4297394-4297507 106 1e-23
10_02_0199 + 6668902-6669293,6669825-6669882 33 0.17
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 30 1.2
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 30 1.2
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 30 1.6
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 30 1.6
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 29 2.1
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 29 2.1
05_03_0163 + 9070781-9071320 29 2.7
09_02_0565 + 10710770-10711003,10711368-10711527,10712277-107124... 29 3.6
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 28 6.3
12_01_0559 + 4527769-4527924,4528038-4528129,4528799-4528905,452... 28 6.3
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 6.3
10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955 27 8.3
09_03_0100 + 12363061-12363333 27 8.3
08_02_1437 - 27096364-27097252,27098931-27099022,27099382-270996... 27 8.3
05_03_0446 + 14111667-14111906,14112011-14112418 27 8.3
05_03_0419 - 13707843-13707860,13707936-13708010,13708251-137082... 27 8.3
04_04_1660 - 35140641-35141894 27 8.3
04_03_1035 - 21887562-21890030 27 8.3
04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043 27 8.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 27 8.3
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 27 8.3
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 107 bits (256), Expect = 8e-24
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWH 115
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 243 HQTS 254
HQTS
Sbjct: 63 HQTS 66
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1
Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516
+ ++AAT VP+LV ARGH IE +P FP
Sbjct: 127 VASALAATAVPSLVLARGHRIEGVPEFP 154
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 106 bits (255), Expect = 1e-23
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 68 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWH 116
Score = 61.3 bits (142), Expect = 6e-10
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 249 TS 254
TS
Sbjct: 66 TS 67
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516
+ ++AAT VP+LV ARGH IE +P P
Sbjct: 128 VASALAATSVPSLVLARGHRIETVPELP 155
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 364
RE GG + +SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGGA----QSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = +2
Query: 38 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 193
ASL N + P+F V G SQA V + GAH G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Frame = +2
Query: 200 QELEAALLREQGGWSPNQSESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 364
+++ A ++GG S ++S+ G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGS-DKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 365 MFAPTKP-WR 391
M P P WR
Sbjct: 123 MLRPGFPKWR 132
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 162 RPDLVNDVHVSMSKNSRQP--YCVSKEAGHQTSLNHGVLD 275
RP + DV S S +S P SK++GH L HG +D
Sbjct: 38 RPSSITDVSRSCSSSSSSPPRSLSSKQSGHADVLAHGAVD 77
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAV 283
EAALLR G W+ + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 38 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 193
ASL N I +PTF +G + G S + + GAH G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGT--HRSGQGAF 340
R + GW +Q++ + + R P +GGG R GQG F
Sbjct: 1121 RREQGWDAHQAQVGAQHQNLPRFPPQQGGGNIGERQGQGQF 1161
>05_03_0163 + 9070781-9071320
Length = 179
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQG 334
R GGWS ++E WG G ++ GGG RS +G
Sbjct: 15 RGAGGWS-QRAEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>09_02_0565 +
10710770-10711003,10711368-10711527,10712277-10712477,
10712564-10712628,10712740-10712767,10712847-10712923,
10713023-10713109,10713572-10713622,10713857-10713937,
10714125-10714346,10714424-10714517,10714608-10714748,
10716383-10716444,10716519-10717106
Length = 696
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 382 ALAALAPSRQPPTAESGLGG-SVAATGVPALVQARGHIIEKIPGFPWL*PTNSKRSTRPN 558
A AA+A R+ + S GG + AA V A I+ K+ F W NS P
Sbjct: 20 AAAAVAADRRAFSVTSAAGGGAAAAAAVVAATPEEVGILRKVANFLWQTDGNSYHHVWPE 79
Query: 559 M 561
M
Sbjct: 80 M 80
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 245 PNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
P + G G A + RV GGG+ G+GA + G + W
Sbjct: 77 PERRRQEGAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLW 124
>12_01_0559 +
4527769-4527924,4528038-4528129,4528799-4528905,
4528987-4529042,4529196-4529346,4530223-4530528,
4530753-4531597
Length = 570
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 275 VQYPMIQTGLVTSLLAHAVGLPRVL 201
V+ P +TG S LA AVG+PRVL
Sbjct: 89 VENPHKKTGYSISELAEAVGIPRVL 113
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 380 SWGRTYVHHDTCYRRHPDRTYEYHH 306
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955
Length = 184
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 233 GGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFG 343
GG N WG+G + + GGG + SG G G
Sbjct: 38 GGGGSNGGSGWGSGSG-SGYGQASGGGAYASGGGGAG 73
>09_03_0100 + 12363061-12363333
Length = 90
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = -3
Query: 320 YEYHHHGHAEFGRQHVQYPMIQTGLVTSLLAHAVGLPRVLGHRNVNIIDQVRTDGRLEHE 141
YE+ HH H G + P + V + L AV + V R ++R GR
Sbjct: 6 YEHWHHHHQSVGVDEEEAPPVHLLAVDAFLEEAVPVDMVAAARREEEA-RLRRGGRPRSR 64
Query: 140 REGL 129
+G+
Sbjct: 65 EDGM 68
>08_02_1437 -
27096364-27097252,27098931-27099022,27099382-27099654,
27099872-27100819
Length = 733
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 370 RPHEALAALAPSRQPPTAESGLGGSVAATGVPALVQARGHII 495
R ++ L+ +A +PP +S G A G PA+ G+ +
Sbjct: 653 RVNDWLSEIAKPTEPPPPQSDADGEEAGGGAPAVANGGGNTV 694
>05_03_0446 + 14111667-14111906,14112011-14112418
Length = 215
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 367 VRPHEALAALAPSRQPPTAESGLGGSVAATG 459
+RP ++LA L+P+R +A +G G + A +G
Sbjct: 114 LRPTKSLAHLSPARASSSAAAGGGSATAPSG 144
>05_03_0419 -
13707843-13707860,13707936-13708010,13708251-13708286,
13709718-13709765,13710246-13710326,13710503-13710554,
13710671-13710730,13711266-13711346,13711461-13711577,
13711714-13711754,13711981-13712059,13712136-13712292,
13712586-13712718,13712799-13712926,13715152-13715314
Length = 422
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -3
Query: 254 TGLVTSLLAHAVGLPRVLGHRNVNIIDQVRTD-GRLEHEREGLG 126
TG+ +L+ + VG+P+VL ++ I Q+ D G +E +RE G
Sbjct: 205 TGVYKTLVRYLVGVPQVL----LDFIRQINDDNGPMEEQRERYG 244
>04_04_1660 - 35140641-35141894
Length = 417
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 233 GGWSPNQSESWGTGRAVARIPRVRGGGTHR 322
GGW+P + +WG + + PR+ G R
Sbjct: 255 GGWAPVERSAWGDVFEILKRPRLLAGAGGR 284
>04_03_1035 - 21887562-21890030
Length = 822
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 194 YVQELEAALLREQGGWSPNQSESWGT-GRAVARIPRVRGGGTHRSGQGAFGNMCRGG 361
YV L A +R G P SE G RAVA GG G+ A C G
Sbjct: 762 YVGYLAADCVRLAGRDRPTMSEVVGVLERAVAACDEYEEGGAGAGGEPALSRSCTDG 818
>04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043
Length = 436
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -3
Query: 284 RQHVQYPMIQTGLVTSLLAHAVGLPRVLGHRNVNIIDQVR 165
++HV +P G + L+ A L R+L H + ++ R
Sbjct: 5 KKHVLFPFTSKGHIAGFLSLASRLHRILPHATITLVSTPR 44
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 373 PHEALAALAPSRQPPTAESGLGGSVAATGVPA 468
P A +AP PP G+GG G PA
Sbjct: 1175 PPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPA 1206
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -3
Query: 323 TYEYHH-HGHAEFGRQH 276
T+++HH HGH FGR H
Sbjct: 144 THDHHHGHGHHLFGRDH 160
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,671,030
Number of Sequences: 37544
Number of extensions: 383136
Number of successful extensions: 1631
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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