BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021281 (586 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 109 4e-24 X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 109 4e-24 BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 109 4e-24 AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 109 4e-24 AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 109 4e-24 BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p pro... 31 1.5 BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p pro... 31 1.5 AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.5 AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ... 31 1.5 AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.5 AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.5 BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p pro... 30 2.0 AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro... 30 2.0 AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P... 30 2.0 AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 30 2.0 BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 3.5 AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 3.5 AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 29 4.6 AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 29 4.6 AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 29 4.6 AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 29 4.6 AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p pro... 28 8.1 AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p pro... 28 8.1 AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-P... 28 8.1 >X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Drosophila melanogastermRNA for put. ribosomal protein L1. ). Length = 407 Score = 109 bits (261), Expect = 4e-24 Identities = 46/49 (93%), Positives = 48/49 (97%) Frame = +2 Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400 +ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH Sbjct: 67 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115 Score = 83.8 bits (198), Expect = 2e-16 Identities = 41/66 (62%), Positives = 50/66 (75%) Frame = +3 Query: 57 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 236 MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60 Query: 237 AGHQTS 254 AGHQTS Sbjct: 61 AGHQTS 66 Score = 40.3 bits (90), Expect = 0.002 Identities = 18/27 (66%), Positives = 22/27 (81%) Frame = +3 Query: 504 SRLPLVVADKFQEINKTKHAVIFLRRL 584 S PLVV+D+ Q++ KTK AVIFLRRL Sbjct: 151 SEFPLVVSDEVQKVQKTKQAVIFLRRL 177 Score = 38.3 bits (85), Expect = 0.008 Identities = 15/28 (53%), Positives = 23/28 (82%) Frame = +1 Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516 L ++AA+GVPALVQ++GH+I+ + FP Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154 >X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Drosophila gene forribosomal protein L1 fragment. ). Length = 123 Score = 109 bits (261), Expect = 4e-24 Identities = 46/49 (93%), Positives = 48/49 (97%) Frame = +2 Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400 +ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH Sbjct: 5 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 53 Score = 40.3 bits (90), Expect = 0.002 Identities = 18/27 (66%), Positives = 22/27 (81%) Frame = +3 Query: 504 SRLPLVVADKFQEINKTKHAVIFLRRL 584 S PLVV+D+ Q++ KTK AVIFLRRL Sbjct: 89 SEFPLVVSDEVQKVQKTKQAVIFLRRL 115 Score = 38.3 bits (85), Expect = 0.008 Identities = 15/28 (53%), Positives = 23/28 (82%) Frame = +1 Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516 L ++AA+GVPALVQ++GH+I+ + FP Sbjct: 65 LVSAIAASGVPALVQSKGHVIDGVSEFP 92 >BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p protein. Length = 233 Score = 109 bits (261), Expect = 4e-24 Identities = 46/49 (93%), Positives = 48/49 (97%) Frame = +2 Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400 +ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH Sbjct: 67 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115 Score = 83.8 bits (198), Expect = 2e-16 Identities = 41/66 (62%), Positives = 50/66 (75%) Frame = +3 Query: 57 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 236 MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60 Query: 237 AGHQTS 254 AGHQTS Sbjct: 61 AGHQTS 66 Score = 40.3 bits (90), Expect = 0.002 Identities = 18/27 (66%), Positives = 22/27 (81%) Frame = +3 Query: 504 SRLPLVVADKFQEINKTKHAVIFLRRL 584 S PLVV+D+ Q++ KTK AVIFLRRL Sbjct: 151 SEFPLVVSDEVQKVQKTKQAVIFLRRL 177 Score = 38.3 bits (85), Expect = 0.008 Identities = 15/28 (53%), Positives = 23/28 (82%) Frame = +1 Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516 L ++AA+GVPALVQ++GH+I+ + FP Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154 >AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p protein. Length = 401 Score = 109 bits (261), Expect = 4e-24 Identities = 46/49 (93%), Positives = 48/49 (97%) Frame = +2 Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400 +ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH Sbjct: 67 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115 Score = 83.8 bits (198), Expect = 2e-16 Identities = 41/66 (62%), Positives = 50/66 (75%) Frame = +3 Query: 57 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 236 MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60 Query: 237 AGHQTS 254 AGHQTS Sbjct: 61 AGHQTS 66 Score = 40.3 bits (90), Expect = 0.002 Identities = 18/27 (66%), Positives = 22/27 (81%) Frame = +3 Query: 504 SRLPLVVADKFQEINKTKHAVIFLRRL 584 S PLVV+D+ Q++ KTK AVIFLRRL Sbjct: 151 SEFPLVVSDEVQKVQKTKQAVIFLRRL 177 Score = 38.3 bits (85), Expect = 0.008 Identities = 15/28 (53%), Positives = 23/28 (82%) Frame = +1 Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516 L ++AA+GVPALVQ++GH+I+ + FP Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154 >AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA protein. Length = 401 Score = 109 bits (261), Expect = 4e-24 Identities = 46/49 (93%), Positives = 48/49 (97%) Frame = +2 Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400 +ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH Sbjct: 67 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115 Score = 83.8 bits (198), Expect = 2e-16 Identities = 41/66 (62%), Positives = 50/66 (75%) Frame = +3 Query: 57 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 236 MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60 Query: 237 AGHQTS 254 AGHQTS Sbjct: 61 AGHQTS 66 Score = 40.3 bits (90), Expect = 0.002 Identities = 18/27 (66%), Positives = 22/27 (81%) Frame = +3 Query: 504 SRLPLVVADKFQEINKTKHAVIFLRRL 584 S PLVV+D+ Q++ KTK AVIFLRRL Sbjct: 151 SEFPLVVSDEVQKVQKTKQAVIFLRRL 177 Score = 38.3 bits (85), Expect = 0.008 Identities = 15/28 (53%), Positives = 23/28 (82%) Frame = +1 Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516 L ++AA+GVPALVQ++GH+I+ + FP Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154 >BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p protein. Length = 1489 Score = 30.7 bits (66), Expect = 1.5 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = +2 Query: 200 QELEAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 361 + L A L +QGG PN + G G + + R G ++R G G GG Sbjct: 611 KHLTQAPLYQQGGGGPNYNRGGGAGSSDSYNNRYSGNTSYRGGGGGGAGGSSGG 664 >BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p protein. Length = 1489 Score = 30.7 bits (66), Expect = 1.5 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = +2 Query: 200 QELEAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 361 + L A L +QGG PN + G G + + R G ++R G G GG Sbjct: 611 KHLTQAPLYQQGGGGPNYNRGGGAGSSDSYNNRYSGNTSYRGGGGGGAGGSSGG 664 >AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p protein. Length = 872 Score = 30.7 bits (66), Expect = 1.5 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = +1 Query: 274 TCCRP-NSACPWWWYS*VRSGC 336 TCC P ++ CPW WY +GC Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739 >AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA protein. Length = 2296 Score = 30.7 bits (66), Expect = 1.5 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = +2 Query: 200 QELEAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 361 + L A L +QGG PN + G G + + R G ++R G G GG Sbjct: 611 KHLTQAPLYQQGGGGPNYNRGGGAGSSDSYNNRYSGNTSYRGGGGGGAGGSSGG 664 >AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB, isoform B protein. Length = 271 Score = 30.7 bits (66), Expect = 1.5 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = +1 Query: 274 TCCRP-NSACPWWWYS*VRSGC 336 TCC P ++ CPW WY +GC Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138 >AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA, isoform A protein. Length = 872 Score = 30.7 bits (66), Expect = 1.5 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = +1 Query: 274 TCCRP-NSACPWWWYS*VRSGC 336 TCC P ++ CPW WY +GC Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739 >BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p protein. Length = 1103 Score = 30.3 bits (65), Expect = 2.0 Identities = 16/58 (27%), Positives = 22/58 (37%) Frame = -3 Query: 374 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQTGLVTSLLAHAVGLPRVL 201 G T HH + H + HH H G ++S LA A GL R++ Sbjct: 1004 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1061 >AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p protein. Length = 1413 Score = 30.3 bits (65), Expect = 2.0 Identities = 16/58 (27%), Positives = 22/58 (37%) Frame = -3 Query: 374 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQTGLVTSLLAHAVGLPRVL 201 G T HH + H + HH H G ++S LA A GL R++ Sbjct: 1314 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1371 >AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA, isoform A protein. Length = 1413 Score = 30.3 bits (65), Expect = 2.0 Identities = 16/58 (27%), Positives = 22/58 (37%) Frame = -3 Query: 374 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQTGLVTSLLAHAVGLPRVL 201 G T HH + H + HH H G ++S LA A GL R++ Sbjct: 1314 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1371 >AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB, isoform B protein. Length = 1700 Score = 30.3 bits (65), Expect = 2.0 Identities = 16/58 (27%), Positives = 22/58 (37%) Frame = -3 Query: 374 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQTGLVTSLLAHAVGLPRVL 201 G T HH + H + HH H G ++S LA A GL R++ Sbjct: 1601 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1658 >BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p protein. Length = 1953 Score = 29.5 bits (63), Expect = 3.5 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 62 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 175 ++GSP ++VG G G S APP V AH +G G Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326 >AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC protein. Length = 2528 Score = 29.5 bits (63), Expect = 3.5 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 62 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 175 ++GSP ++VG G G S APP V AH +G G Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326 >AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein. Length = 2176 Score = 29.1 bits (62), Expect = 4.6 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +2 Query: 230 QGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 361 +GG S ES GT + V ++ R GG SG G + GG Sbjct: 918 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961 >AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 protein. Length = 2342 Score = 29.1 bits (62), Expect = 4.6 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +2 Query: 230 QGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 361 +GG S ES GT + V ++ R GG SG G + GG Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085 >AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein EAST protein. Length = 2362 Score = 29.1 bits (62), Expect = 4.6 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +2 Query: 230 QGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 361 +GG S ES GT + V ++ R GG SG G + GG Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138 >AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB protein. Length = 2301 Score = 29.1 bits (62), Expect = 4.6 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +2 Query: 230 QGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 361 +GG S ES GT + V ++ R GG SG G + GG Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085 >AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p protein. Length = 493 Score = 28.3 bits (60), Expect = 8.1 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +3 Query: 144 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSLNHGVLDVLSPEF 293 +F RPD+ D+ ++ SK C+ + GH + +LDV+ +F Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGHISC--EDILDVVFKDF 489 >AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p protein. Length = 493 Score = 28.3 bits (60), Expect = 8.1 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +3 Query: 144 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSLNHGVLDVLSPEF 293 +F RPD+ D+ ++ SK C+ + GH + +LDV+ +F Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGHISC--EDILDVVFKDF 489 >AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-PA protein. Length = 493 Score = 28.3 bits (60), Expect = 8.1 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +3 Query: 144 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSLNHGVLDVLSPEF 293 +F RPD+ D+ ++ SK C+ + GH + +LDV+ +F Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGHISC--EDILDVVFKDF 489 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,574,286 Number of Sequences: 53049 Number of extensions: 598389 Number of successful extensions: 3627 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2557 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3483 length of database: 24,988,368 effective HSP length: 81 effective length of database: 20,691,399 effective search space used: 2338128087 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -