Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021280
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.11 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.4  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    23   2.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = -3

Query: 387 WEDHLRFNPYCIHGNIGFSECCFID--CHFDLFATR 286
           WEDHL    + + G + F    F+     FDLF  +
Sbjct: 309 WEDHLAVKHFSVEGQLEFRALLFVPRRVPFDLFENK 344


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 365 LNLRWSSQQNAGRELLH 415
           LN  WSSQ +   EL+H
Sbjct: 331 LNFDWSSQVSKAGELIH 347


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 606 TSV*PVCCWLHEGTTLWPSSGQD 674
           TS+ PV  W+H G  ++ S   D
Sbjct: 70  TSLYPVLVWIHGGYFIFGSGNDD 92


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 631 QQHTG*TLVALYYKISTPFISMFIF 557
           ++H    +  +Y + STP++ ++IF
Sbjct: 48  KEHIFERIRTIYNQFSTPYVGIYIF 72


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 592  CNKGPRASSPYVVGYTKEL 648
            CNKGP +       + KEL
Sbjct: 1954 CNKGPASDKSAFADFVKEL 1972



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 592  CNKGPRASSPYVVGYTKEL 648
            CNKGP +       + +EL
Sbjct: 2452 CNKGPDSDKEAFAAFVREL 2470


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 286 PSGEKVKVTIDEAAFAKPNVPM 351
           P+G+ V   IDE ++  P  P+
Sbjct: 519 PNGDHVISLIDEISYMAPPAPL 540


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 338 PMFPWIQ*GLNLRWSSQQNAG 400
           P +PW++     R SSQQ  G
Sbjct: 113 PEYPWMKEKKTTRKSSQQENG 133


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 155 YNLGGLCTPMMGFGLVFLDSC*FNYVFHFHILNLQ*VLFI 36
           Y+L  L    + F L+  DS    YVF FH+ +++ V+ +
Sbjct: 251 YSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDVRYVMVV 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,804
Number of Sequences: 336
Number of extensions: 3980
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)