Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021279
         (863 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.58 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   7.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.4  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 138 FQGKNCGESID-C*SNECDS 194
           + GK+CGE +D C +N C++
Sbjct: 91  YTGKDCGEYVDWCSTNPCEN 110


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 176 LTIDTFTAVFPLKVNFSRFGINSN 105
           +T   F  +FP+ +N  + G+N N
Sbjct: 27  VTFAHFICLFPITINIRKNGLNYN 50


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 779 YKDYFDIAYPLPKIDLI 829
           YK+  D+AY LP +  +
Sbjct: 809 YKEVIDVAYDLPALGTV 825


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = -3

Query: 294 QLYSILLTMELSLIRA-IVILKFHIFQIQV*AIQYYHIRWINNRYFHRSFSLESKFFQIW 118
           Q  S+++  E    R+ I +   ++F        Y+  R    +Y+     L   FF ++
Sbjct: 117 QNVSLIINYENQRTRSRIHLFVRYVFVTSYLLFDYFVQRNQEYKYYQILSHLSGIFFTVF 176

Query: 117 NQFQCIMLRNHIIRKSLKRLVL 52
           N  QC +    ++    + ++L
Sbjct: 177 NVAQCYLTTELVLMLQTRFVIL 198


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 619 LCQIV*SLYCLQSFL 575
           LCQ+  S+Y  Q+FL
Sbjct: 224 LCQVANSIYGFQNFL 238


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = +3

Query: 135 YFQGKNC-GESID 170
           Y+QGKNC G  +D
Sbjct: 255 YYQGKNCVGGKVD 267


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 597 CIVCNLFLFYRHIRQSN 547
           C VCN    Y+H+ Q++
Sbjct: 137 CEVCNRSFGYKHVLQNH 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,256
Number of Sequences: 336
Number of extensions: 4489
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)