Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021279
(863 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 62 4e-10
SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 61 1e-09
SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 59 5e-09
SB_17630| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_35142| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-13) 54 2e-07
SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 52 5e-07
SB_37656| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_28575| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-07) 47 2e-05
SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08) 46 3e-05
SB_54833| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 44 1e-04
SB_16863| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_32141| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_45004| Best HMM Match : Peptidase_M1 (HMM E-Value=0.0054) 42 9e-04
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 39 0.005
SB_45006| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_38519| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_33033| Best HMM Match : G-patch (HMM E-Value=0.71) 28 8.5
>SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 904
Score = 62.5 bits (145), Expect = 4e-10
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Frame = +1
Query: 70 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDG 249
RLP NV+P HY + L L++ F G + + +++ T++I+++S +++ + + G
Sbjct: 240 RLPKNVVPVHYNVYLNIILKELRFTGTSEIHLNVTQSTDLILVHSARMNVTSGSVMNKAG 299
Query: 250 SN---QR*FHRQ*N*VQLMKQQVFISQNLY*KANDALF*VYR*NK*QNERLVPQ*IHCSQ 420
++ F + N +++ + + Y F + ++ N Q H
Sbjct: 300 DQQAIKKRFWFEKNQFTVLQMETALEPGPYVVMLG--FEAFLSDQ-LNGLYRSQYTHKDG 356
Query: 421 WRRTICGCHPI*SDRCTTMFPLLG*TCN*TTFDITLQVPADRVALSNMPVKQEKIADNTR 600
TI +D FP L TF+IT++ D +A+SNMP+ + + +
Sbjct: 357 KNVTIATTQFQPTD-ARKAFPCLDEPALKATFNITIEHRPDFIAISNMPIWKNETRNGRT 415
Query: 601 IIQFDTTPIMSTYLVAVVVGEYDYVEKKSNDGILVR 708
+ F+ T +M TYL+A+VV ++ E KS G+++R
Sbjct: 416 VDHFEKTVVMPTYLLAMVVCDFGVKETKSARGVMMR 451
Score = 59.7 bits (138), Expect = 3e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +2
Query: 359 FTGEINDKMKGLYRSKYIAPNGEERYAAVTQFEATDARRCFPCWDEPAIK 508
F ++D++ GLYRS+Y +G+ A TQF+ TDAR+ FPC DEPA+K
Sbjct: 335 FEAFLSDQLNGLYRSQYTHKDGKNVTIATTQFQPTDARKAFPCLDEPALK 384
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +2
Query: 758 G*RVLPYYKDYFDIAYPLPKIDLIAIADFSAGAME 862
G ++L ++ Y++I+YPLPK D+IAI DF+AGAME
Sbjct: 469 GNKILDDFEHYYNISYPLPKADMIAIPDFAAGAME 503
>SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 1240
Score = 60.9 bits (141), Expect = 1e-09
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 356 EFTGEINDKMKGLYRSKYIAPNGEERYAAVTQFEATDARRCFPCWDEPAIK 508
+F + +K+ G Y+S Y +G RY A T FE TDAR FPC+DEPA+K
Sbjct: 228 DFNAVLAEKLTGFYKSSYKDKDGNTRYLATTHFEPTDARAAFPCFDEPALK 278
Score = 53.2 bits (122), Expect = 3e-07
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
Frame = +1
Query: 70 RLPNNVIPKHYALELIPNLEK-FTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYND 246
RLP++V P+ Y + L P L+ FTF G +V+V T+ I +++ + L ++ N
Sbjct: 132 RLPSSVTPEEYTVILRPKLDPDFTFSGNVSVRVKCNEDTDYIFIHAKQMRLTKFEV-LNQ 190
Query: 247 GSNQR*FHRQ*N*VQLMKQQVFISQNLY*KANDALF*VYR*NK*QNERLVPQ*IHCSQWR 426
G N +L + + L K ++ N E+L + S ++
Sbjct: 191 GKEPLKIMETANCEKLEMFSIKVKGGL--KKGESYVLQIDFNAVLAEKLTG--FYKSSYK 246
Query: 427 ------RTICGCHPI*SDRCTTMFPLLG*TCN*TTFDITLQVPADRVALSNMPVKQE-KI 585
R + H +D FP F++ + A+ V+LSNMP+K+ K
Sbjct: 247 DKDGNTRYLATTHFEPTD-ARAAFPCFDEPALKAVFNMVIYRKAEHVSLSNMPIKETFKD 305
Query: 586 ADNTRIIQ-FDTTPIMSTYLVAVVVGEYDYVEKKSNDGILVRV 711
++ ++I F+ + MSTYLVA VV ++ E + G LVRV
Sbjct: 306 KESGQVIDVFEPSVKMSTYLVAFVVCDFKSKEATTKRGTLVRV 348
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2
Query: 764 RVLPYYKDYFDIAYPLPKIDLIAIADFSAGAME 862
++L YY+ +F + YPLPK DLIAI DF+AGAME
Sbjct: 367 KILSYYEKFFAVRYPLPKQDLIAIPDFAAGAME 399
>SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 890
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +1
Query: 511 TFDITLQVPADRVALSNMPVKQEKIADNTRIIQFDTTPIMSTYLVAVVVGEYDYVEKKSN 690
TF+IT+ D VALSNMP+ Q KI D R F+ + +MSTYLVA VG++ Y E +
Sbjct: 251 TFNITIAHRPDYVALSNMPIYQSKIIDGQRHDYFEQSVVMSTYLVAFTVGDFYYKETVTE 310
Query: 691 DGI 699
+ +
Sbjct: 311 NNV 313
Score = 51.6 bits (118), Expect = 8e-07
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 359 FTGEINDKMKGLYRSKYIAPNGEERYAAVTQFEATDARRCFPCWDEPAIK 508
+ G + ++G YRS + NG+ Y TQFE AR FPC+DEP +K
Sbjct: 200 YKGFYSKGLRGFYRSSFTQNNGQRVYFVATQFEPVKAREAFPCFDEPGMK 249
>SB_17630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 54.4 bits (125), Expect = 1e-07
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +1
Query: 589 DNTRIIQFDTTPIMSTYLVAVVVGEYDYVEKKSNDGILVRV 711
++ +++++ TPIMSTYL+A VVGE+DYVE +DG+ VRV
Sbjct: 12 NSLKVVKYARTPIMSTYLLAFVVGEFDYVEGSDSDGVAVRV 52
>SB_35142| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-13)
Length = 302
Score = 54.0 bits (124), Expect = 2e-07
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = +2
Query: 767 VLPYYKDYFDIAYPLPKIDLIAIADFSAGAME 862
VL YY+ +F+I YPLPKIDL+A+ DF+AGAME
Sbjct: 233 VLSYYEKFFNIPYPLPKIDLVAVPDFAAGAME 264
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 70 RLPNNVIPKHYALELIPNLE-KFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKL 234
RLP +V+P Y L + P L KF F GK A+ + +V T IVL+S L +K+ +L
Sbjct: 91 RLPKDVVPTKYTLTMHPVLSGKFDFTGKAAIDIKVVKNTKYIVLHSKKLKIKSYRL 146
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 356 EFTGEINDKMKGLYRSKYIAPNGEERYAAVTQFEATDARR 475
EF+GE+++KM G Y+S Y NGE R A Q EA D+ +
Sbjct: 187 EFSGELSNKMAGFYKSSYKTRNGEVRVWA--QKEALDSTK 224
>SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 791
Score = 52.4 bits (120), Expect = 5e-07
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 356 EFTGEINDKMKGLYRSKYIAPNGEERYAAVTQFEATDARRCFPCWDEPAIK 508
EF G + GL+R Y +G + Y TQFE AR FPC+DEPA+K
Sbjct: 104 EFVGAYGQSVLGLFRGTYKKADGTDAYFVATQFEPHYARTAFPCFDEPALK 154
Score = 51.2 bits (117), Expect = 1e-06
Identities = 30/81 (37%), Positives = 39/81 (48%)
Frame = +1
Query: 472 TMFPLLG*TCN*TTFDITLQVPADRVALSNMPVKQEKIADNTRIIQFDTTPIMSTYLVAV 651
T FP TF+ T+ P+D A +N N + F T+P M TYL A
Sbjct: 143 TAFPCFDEPALKATFNTTITHPSDMQAFTNGAQVSSAPKGNLTMTSFATSPKMQTYLNAF 202
Query: 652 VVGEYDYVEKKSNDGILVRVI 714
VG Y+ +EK SN G+ VR I
Sbjct: 203 DVGYYELMEKTSNSGVKVRTI 223
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 782 KDYFDIAYPLPKIDLIA 832
+ +F I YPLPK+DLIA
Sbjct: 247 EQFFGIPYPLPKLDLIA 263
>SB_37656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 356 EFTGEINDKMKGLYRSKYIAPNGEERYAAVTQFE 457
+FTGE+NDKMKG YRSKY+ +E+Y AVTQFE
Sbjct: 61 DFTGELNDKMKGFYRSKYM-DGEQEKYCAVTQFE 93
>SB_28575| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-07)
Length = 287
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 764 RVLPYYKDYFDIAYPLPKIDLIAIADFSAGAME 862
+VLP+Y YF I YPLPK D+IA+ DF AME
Sbjct: 14 KVLPFYAQYFGIDYPLPKADMIALPDFVFRAME 46
>SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08)
Length = 326
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 478 FPLLG*TCN*TTFDITLQVPADRVALSNMPVKQEKIADNTRIIQ-FDTTPIMSTYLVAVV 654
FP L TF++T+ A VAL NMP+ DN + Q + T+ +M TYL+A V
Sbjct: 228 FPCLDEPALKATFNVTIAHHARYVALCNMPISSSTRVDNQIVDQYYQTSVVMPTYLLAFV 287
Query: 655 VGEY 666
VGE+
Sbjct: 288 VGEF 291
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 428 ERYAAVTQFEATDARRCFPCWDEPAIK 508
+ Y A TQFE +DAR+ FPC DEPA+K
Sbjct: 211 DSYFAATQFERSDARKAFPCLDEPALK 237
Score = 34.7 bits (76), Expect = 0.098
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 70 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNS 204
RLP +VIP HY + L +++ F G+ + ++ T+V++L+S
Sbjct: 33 RLPGDVIPTHYNINLNITVDQPHFHGRVNMFANVTRATSVLLLHS 77
>SB_54833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 70 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNS 204
RLP NVIP HY L L PNL TF+G+ + V ++ T I++++
Sbjct: 69 RLPTNVIPVHYDLFLHPNLTTGTFEGEVEILVDVLQETEYILVHT 113
>SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 854
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 70 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNS 204
RLP NVIP HY L L PNL TF+G+ + V ++ T I++++
Sbjct: 94 RLPTNVIPVHYDLFLHPNLTTGTFEGEVEILVDVLQETEYILVHT 138
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 11/44 (25%)
Frame = +2
Query: 764 RVLPYYKDYFDIAYPLPK-----------IDLIAIADFSAGAME 862
+++ Y++ Y+ + YPLPK IDLIAI DFS+GAME
Sbjct: 364 KIITYFEKYYKVMYPLPKQDIDNPIAVCLIDLIAIPDFSSGAME 407
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 440 AVTQFEATDARRCFPCWDEPAIK 508
A T+FE TDAR+ PC+DEPA+K
Sbjct: 245 ATTKFEPTDARKALPCFDEPAMK 267
>SB_16863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 428 ERYAAVTQFEATDARRCFPCWDEPAIK 508
+ Y A TQFE +DAR+ FPC DEPA+K
Sbjct: 5 DSYFAATQFERSDARKAFPCLDEPALK 31
>SB_32141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 42.7 bits (96), Expect = 4e-04
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +2
Query: 434 YAAVTQFEATDARRCFPCWDEPAIK 508
Y A T FE TDAR FPC+DEPA+K
Sbjct: 41 YLATTHFEPTDARAAFPCFDEPALK 65
>SB_45004| Best HMM Match : Peptidase_M1 (HMM E-Value=0.0054)
Length = 236
Score = 41.5 bits (93), Expect = 9e-04
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 359 FTGEINDKMKGLYRSKY-IAPNGEERYAAVTQFEATDARRCFPCWDEPAIK 508
F G + D++ GL+ Y IA N Y A +QF +AR FPC+DEPA K
Sbjct: 45 FNGLLGDEV-GLFVGNYKIADNATRSYVA-SQFGPAEARSVFPCFDEPAFK 93
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 70 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLN 201
RLP NVIP +Y L L N++K + G + V++ T++++L+
Sbjct: 1446 RLPTNVIPNNYDLYLDVNMKKKNYTGSVNILVTVTQSTDLVILH 1489
>SB_45006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 70 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLN 201
RLP NVIP +Y L L N++K + G + V++ T++++L+
Sbjct: 32 RLPTNVIPNNYDLYLDVNMKKKNYTGSVNILVTVTQSTDLVILH 75
>SB_38519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 23 RSRKKK*QCQRTSRFNDFLIM*FLSIMHWN*FQIWKNLLSREKLR*KYRLLIQ 181
+ +K+K QCQR + + L LS HW F W++LL + R R+ +Q
Sbjct: 54 QEKKRKLQCQRNT--SKRLAALSLSRCHWLCFLTWQSLLIHREKRSFSRMKMQ 104
>SB_33033| Best HMM Match : G-patch (HMM E-Value=0.71)
Length = 696
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 404 KYIAPNGEERYAAVTQFEATDARRC 478
+ I GEE++A +T+FE D + C
Sbjct: 591 RLIRSEGEEKFADMTEFETVDLQNC 615
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,734,228
Number of Sequences: 59808
Number of extensions: 523024
Number of successful extensions: 1244
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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