Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021279
         (863 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   3.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   4.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.3  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 450 NLKRQMHDDVSLAGMNLQLNHF*YNLTSSG*SCCFV*YAC 569
           ++KR++ +D  +  MN   N    NLT        V YAC
Sbjct: 497 SVKRELGNDTVIVMMNFSKNPVTVNLTKLHPPADLVVYAC 536


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -3

Query: 336 LLVKILRNKYLLFHQLYSILLTMELSLIRAIV 241
           LLV  L N+  LF Q Y  +L + L  IRA V
Sbjct: 89  LLVLGLPNELSLFWQQYPWVLGVSLCKIRAYV 120


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 793 KVIFIIRQNSSATSSANNPCLLLPTGV*P 707
           ++IF  R+   +  S N P LL+ +G+ P
Sbjct: 309 RIIFARREVILSAGSVNTPQLLMLSGIGP 337


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 631 STYLVAVVVGEYDYVEKKSNDGILVRVI 714
           +T  +A+VVGE+D+  K   +  ++  I
Sbjct: 209 NTTKLAIVVGEHDWSSKTETNATVLHSI 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,001
Number of Sequences: 438
Number of extensions: 4702
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)