Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021278
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    52   4e-09
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    24   1.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   3.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   3.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.9  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   7.8  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   7.8  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   7.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.8  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 52.4 bits (120), Expect = 4e-09
 Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
 Frame = +2

Query: 515 SQTGSGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHT 682
           +QTGSGKT A++LP I ++  +  PP    +   P+ ++++PTRELA QI      F + 
Sbjct: 202 AQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYN 261

Query: 683 SYVRNTCVFGG 715
           S V+   ++GG
Sbjct: 262 STVKVAVIYGG 272



 Score = 43.6 bits (98), Expect = 2e-06
 Identities = 20/56 (35%), Positives = 33/56 (58%)
 Frame = +1

Query: 346 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
           EV V+G +   PI  FE +    ++ + VK  GY +PT IQ    P+ +SG++L++
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMS 200


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   VDPASERIHSLNKHLQLNPKN 63
           VDP SER+    + L++NP N
Sbjct: 511 VDPDSERMAFWQRILKINPNN 531


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 581 VGYLCAQLLARCRPTFCRN 525
           +GY+C   +  CRP  C N
Sbjct: 253 LGYICEINVDDCRPGACHN 271


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +1

Query: 541 GLHLASNCAHK*PTAYSER*WSDCFGLGAYQRVSTTNSASCCRF-WTHILCS*HVCVW 711
           G  LA N  +     YS   W+D  G G ++           +F +T+ LC   VC++
Sbjct: 113 GRFLAPNLTYLLVALYSGYVWTDILGFGYFREYLAEAVQLYFQFYYTYFLCV-IVCIF 169


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   VDPASERIHSLNKHLQLNPKN 63
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   VDPASERIHSLNKHLQLNPKN 63
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 150 GLATVAIDLEDLEALVGKKNSLEGRTCDA 236
           G+   +I+ +DL A  G KN+L     DA
Sbjct: 345 GVMIWSIETDDLHATCGTKNALLHAVNDA 373


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -3

Query: 196 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 38
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -3

Query: 196 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 38
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL  + K+N  LG AC  +  I
Sbjct: 173 LLVDYMKKNKTLGAACGRIHPI 194


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL  + K+N  LG AC  +  I
Sbjct: 487 LLVDYMKKNKTLGAACGRIHPI 508


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL  + K+N  LG AC  +  I
Sbjct: 720 LLVDYMKKNKTLGAACGRIHPI 741


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL  + K+N  LG AC  +  I
Sbjct: 720 LLVDYMKKNKTLGAACGRIHPI 741


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory
          receptor candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 91 AIIPVTRHDYFSDLVEDVYL 32
          A++PV +H     LV  VYL
Sbjct: 18 ALLPVKKHHRLEKLVPCVYL 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,699
Number of Sequences: 336
Number of extensions: 4009
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)