Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021277
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.9  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.8  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   5.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = -2

Query: 303 CHAVRQGVHKRCPHGSI*CPCRFRRISCKAGTC 205
           CH +       CP G++   C      C+ G C
Sbjct: 237 CHDLVNSFSCSCPSGTLGYICEINVDDCRPGAC 269



 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/34 (26%), Positives = 12/34 (35%)
 Frame = -2

Query: 306 ICHAVRQGVHKRCPHGSI*CPCRFRRISCKAGTC 205
           +C  +  G    CP G     C F    C +  C
Sbjct: 352 VCTTIHAGHKCTCPEGFYGKNCEFSGYDCDSNPC 385


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 337 RAEIKGTEQVVVDAFVPPRPPNTTSEAKNPKPTVK 441
           R  +  TE   V + +PP PP    ++  P+   K
Sbjct: 198 RCVVPPTEDCDVPSTIPPPPPEEDDDSNIPQNNPK 232


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = -1

Query: 304 LPRSETGRAQEMPARLYLMSLSFSAHILQSWNVLPISQYNSYCSWV 167
           +P  +  + Q +  +L    + F  H+L + N L +    + CS+V
Sbjct: 126 MPSDKLSKIQTL--KLAARYIDFLYHVLSNENALDVDLIGNVCSYV 169


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +1

Query: 133  PSYRPPRITSQ-*PKSNTSCTAK 198
            PSYRPP  T+    K+ TS T +
Sbjct: 1172 PSYRPPSTTNHWQTKTTTSTTTR 1194


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 389 GGTNASTTTCSVPF 348
           GG +AS  T SVPF
Sbjct: 235 GGASASKVTLSVPF 248


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 696 IYILHYVHSIHRCLFFIY 749
           IY  +Y+H +  C F I+
Sbjct: 258 IYYFYYMHLLFCCAFIIF 275


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/40 (25%), Positives = 16/40 (40%)
 Frame = +2

Query: 632 RSFIML*FFFNYIDNNSFRYTHIHTSLCAFHTPVFIFYLF 751
           + F+    F+N +      +  I T    F TP    Y+F
Sbjct: 33  KPFLFFGSFYNLVIRKEHIFERIRTIYNQFSTPYVGIYIF 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,196
Number of Sequences: 336
Number of extensions: 3530
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)