Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021277
(817 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U87925-1|AAC47487.1| 448|Drosophila melanogaster D-cbl protein. 164 1e-40
AY118593-1|AAM49962.1| 448|Drosophila melanogaster LD46082p pro... 164 1e-40
AJ223175-1|CAA11149.1| 448|Drosophila melanogaster cbl protein. 164 1e-40
AF273749-1|AAG00952.1| 878|Drosophila melanogaster Cbl long iso... 164 1e-40
AE014296-1455|AAF50417.1| 448|Drosophila melanogaster CG7037-PA... 164 1e-40
AE014296-1454|AAF50416.2| 878|Drosophila melanogaster CG7037-PB... 164 1e-40
BT009931-1|AAQ22400.1| 1351|Drosophila melanogaster SD10043p pro... 36 0.066
AY061306-1|AAL28854.1| 743|Drosophila melanogaster LD22256p pro... 36 0.066
AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protei... 36 0.066
AE013599-1638|AAS64861.1| 743|Drosophila melanogaster CG17054-P... 36 0.066
AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-P... 36 0.066
AE013599-1636|AAS64859.1| 1155|Drosophila melanogaster CG17054-P... 36 0.066
AE013599-1635|AAS64858.1| 1155|Drosophila melanogaster CG17054-P... 36 0.066
AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-P... 36 0.066
AY069290-1|AAL39435.1| 299|Drosophila melanogaster GM14467p pro... 30 4.4
AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-P... 30 4.4
AE014296-2478|AAN11788.1| 164|Drosophila melanogaster CG32847-P... 30 4.4
AE014296-286|AAF47512.1| 299|Drosophila melanogaster CG7864-PA ... 30 4.4
AY060297-1|AAL25336.1| 277|Drosophila melanogaster GH14055p pro... 29 5.8
AE014298-2232|AAN09365.1| 224|Drosophila melanogaster CG32581-P... 29 5.8
AE014298-2231|AAS65350.1| 277|Drosophila melanogaster CG8974-PE... 29 5.8
AE014298-2230|AAS65349.1| 277|Drosophila melanogaster CG8974-PD... 29 5.8
AE014298-2229|AAF48517.1| 277|Drosophila melanogaster CG8974-PC... 29 5.8
AE014298-2228|AAG22354.2| 277|Drosophila melanogaster CG8974-PB... 29 5.8
AE014298-2227|AAG22355.2| 277|Drosophila melanogaster CG8974-PA... 29 5.8
AY051695-1|AAK93119.1| 807|Drosophila melanogaster LD24014p pro... 29 7.6
AE014297-325|AAN13257.1| 807|Drosophila melanogaster CG1109-PB,... 29 7.6
AE014297-324|AAF51974.2| 807|Drosophila melanogaster CG1109-PA,... 29 7.6
>U87925-1|AAC47487.1| 448|Drosophila melanogaster D-cbl protein.
Length = 448
Score = 164 bits (399), Expect = 1e-40
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 TADGEILQTIPQNKSLVQALLDGYREGFYLYPDGRDTNPDLSSAIISPAEDHITVTQEQY 182
TA+GEILQTIPQNKSL QALLDG+REGFYLYPDG+ NPDLSSA+ SP EDHITVTQEQY
Sbjct: 297 TAEGEILQTIPQNKSLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDHITVTQEQY 356
Query: 183 ELYCEMGSTFQLCKICAENDKDIR 254
ELYCEMGSTFQLCKICAENDKDIR
Sbjct: 357 ELYCEMGSTFQLCKICAENDKDIR 380
Score = 55.6 bits (128), Expect = 8e-08
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +2
Query: 251 QIEPCGHLLCTPCLTAWQIDSEG 319
+IEPCGHLLCTPCLT+WQ+DSEG
Sbjct: 380 RIEPCGHLLCTPCLTSWQVDSEG 402
Score = 52.4 bits (120), Expect = 7e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 319 QGCPFCRAEIKGTEQVVVDAFVPPRPPN 402
QGCPFCRAEIKGTEQ+VVDAF P + N
Sbjct: 403 QGCPFCRAEIKGTEQIVVDAFDPRKQHN 430
>AY118593-1|AAM49962.1| 448|Drosophila melanogaster LD46082p
protein.
Length = 448
Score = 164 bits (399), Expect = 1e-40
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 TADGEILQTIPQNKSLVQALLDGYREGFYLYPDGRDTNPDLSSAIISPAEDHITVTQEQY 182
TA+GEILQTIPQNKSL QALLDG+REGFYLYPDG+ NPDLSSA+ SP EDHITVTQEQY
Sbjct: 297 TAEGEILQTIPQNKSLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDHITVTQEQY 356
Query: 183 ELYCEMGSTFQLCKICAENDKDIR 254
ELYCEMGSTFQLCKICAENDKDIR
Sbjct: 357 ELYCEMGSTFQLCKICAENDKDIR 380
Score = 55.6 bits (128), Expect = 8e-08
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +2
Query: 251 QIEPCGHLLCTPCLTAWQIDSEG 319
+IEPCGHLLCTPCLT+WQ+DSEG
Sbjct: 380 RIEPCGHLLCTPCLTSWQVDSEG 402
Score = 52.4 bits (120), Expect = 7e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 319 QGCPFCRAEIKGTEQVVVDAFVPPRPPN 402
QGCPFCRAEIKGTEQ+VVDAF P + N
Sbjct: 403 QGCPFCRAEIKGTEQIVVDAFDPRKQHN 430
>AJ223175-1|CAA11149.1| 448|Drosophila melanogaster cbl protein.
Length = 448
Score = 164 bits (399), Expect = 1e-40
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 TADGEILQTIPQNKSLVQALLDGYREGFYLYPDGRDTNPDLSSAIISPAEDHITVTQEQY 182
TA+GEILQTIPQNKSL QALLDG+REGFYLYPDG+ NPDLSSA+ SP EDHITVTQEQY
Sbjct: 297 TAEGEILQTIPQNKSLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDHITVTQEQY 356
Query: 183 ELYCEMGSTFQLCKICAENDKDIR 254
ELYCEMGSTFQLCKICAENDKDIR
Sbjct: 357 ELYCEMGSTFQLCKICAENDKDIR 380
Score = 55.6 bits (128), Expect = 8e-08
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +2
Query: 251 QIEPCGHLLCTPCLTAWQIDSEG 319
+IEPCGHLLCTPCLT+WQ+DSEG
Sbjct: 380 RIEPCGHLLCTPCLTSWQVDSEG 402
Score = 52.4 bits (120), Expect = 7e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 319 QGCPFCRAEIKGTEQVVVDAFVPPRPPN 402
QGCPFCRAEIKGTEQ+VVDAF P + N
Sbjct: 403 QGCPFCRAEIKGTEQIVVDAFDPRKQHN 430
>AF273749-1|AAG00952.1| 878|Drosophila melanogaster Cbl long
isoform protein.
Length = 878
Score = 164 bits (399), Expect = 1e-40
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 TADGEILQTIPQNKSLVQALLDGYREGFYLYPDGRDTNPDLSSAIISPAEDHITVTQEQY 182
TA+GEILQTIPQNKSL QALLDG+REGFYLYPDG+ NPDLSSA+ SP EDHITVTQEQY
Sbjct: 297 TAEGEILQTIPQNKSLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDHITVTQEQY 356
Query: 183 ELYCEMGSTFQLCKICAENDKDIR 254
ELYCEMGSTFQLCKICAENDKDIR
Sbjct: 357 ELYCEMGSTFQLCKICAENDKDIR 380
Score = 55.6 bits (128), Expect = 8e-08
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +2
Query: 251 QIEPCGHLLCTPCLTAWQIDSEG 319
+IEPCGHLLCTPCLT+WQ+DSEG
Sbjct: 380 RIEPCGHLLCTPCLTSWQVDSEG 402
Score = 52.4 bits (120), Expect = 7e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 319 QGCPFCRAEIKGTEQVVVDAFVPPRPPN 402
QGCPFCRAEIKGTEQ+VVDAF P + N
Sbjct: 403 QGCPFCRAEIKGTEQIVVDAFDPRKQHN 430
>AE014296-1455|AAF50417.1| 448|Drosophila melanogaster CG7037-PA,
isoform A protein.
Length = 448
Score = 164 bits (399), Expect = 1e-40
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 TADGEILQTIPQNKSLVQALLDGYREGFYLYPDGRDTNPDLSSAIISPAEDHITVTQEQY 182
TA+GEILQTIPQNKSL QALLDG+REGFYLYPDG+ NPDLSSA+ SP EDHITVTQEQY
Sbjct: 297 TAEGEILQTIPQNKSLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDHITVTQEQY 356
Query: 183 ELYCEMGSTFQLCKICAENDKDIR 254
ELYCEMGSTFQLCKICAENDKDIR
Sbjct: 357 ELYCEMGSTFQLCKICAENDKDIR 380
Score = 55.6 bits (128), Expect = 8e-08
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +2
Query: 251 QIEPCGHLLCTPCLTAWQIDSEG 319
+IEPCGHLLCTPCLT+WQ+DSEG
Sbjct: 380 RIEPCGHLLCTPCLTSWQVDSEG 402
Score = 52.4 bits (120), Expect = 7e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 319 QGCPFCRAEIKGTEQVVVDAFVPPRPPN 402
QGCPFCRAEIKGTEQ+VVDAF P + N
Sbjct: 403 QGCPFCRAEIKGTEQIVVDAFDPRKQHN 430
>AE014296-1454|AAF50416.2| 878|Drosophila melanogaster CG7037-PB,
isoform B protein.
Length = 878
Score = 164 bits (399), Expect = 1e-40
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 TADGEILQTIPQNKSLVQALLDGYREGFYLYPDGRDTNPDLSSAIISPAEDHITVTQEQY 182
TA+GEILQTIPQNKSL QALLDG+REGFYLYPDG+ NPDLSSA+ SP EDHITVTQEQY
Sbjct: 297 TAEGEILQTIPQNKSLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDHITVTQEQY 356
Query: 183 ELYCEMGSTFQLCKICAENDKDIR 254
ELYCEMGSTFQLCKICAENDKDIR
Sbjct: 357 ELYCEMGSTFQLCKICAENDKDIR 380
Score = 55.6 bits (128), Expect = 8e-08
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +2
Query: 251 QIEPCGHLLCTPCLTAWQIDSEG 319
+IEPCGHLLCTPCLT+WQ+DSEG
Sbjct: 380 RIEPCGHLLCTPCLTSWQVDSEG 402
Score = 52.4 bits (120), Expect = 7e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 319 QGCPFCRAEIKGTEQVVVDAFVPPRPPN 402
QGCPFCRAEIKGTEQ+VVDAF P + N
Sbjct: 403 QGCPFCRAEIKGTEQIVVDAFDPRKQHN 430
>BT009931-1|AAQ22400.1| 1351|Drosophila melanogaster SD10043p
protein.
Length = 1351
Score = 35.9 bits (79), Expect = 0.066
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 254 SDVLVVFGAYLAKLERAAHFAVQLVLLLGYCDVILGGRYDGATQI 120
SD+LVV G YL ER H V + ++ G C ++L G D T +
Sbjct: 741 SDILVVLGHYL---ERVQHRGVGMAIVRGLCRLVLRGHVDDRTDV 782
>AY061306-1|AAL28854.1| 743|Drosophila melanogaster LD22256p
protein.
Length = 743
Score = 35.9 bits (79), Expect = 0.066
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 254 SDVLVVFGAYLAKLERAAHFAVQLVLLLGYCDVILGGRYDGATQI 120
SD+LVV G YL ER H V + ++ G C ++L G D T +
Sbjct: 331 SDILVVLGHYL---ERVQHRGVGMAIVRGLCRLVLRGHVDDRTDV 372
>AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protein
protein.
Length = 1153
Score = 35.9 bits (79), Expect = 0.066
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 254 SDVLVVFGAYLAKLERAAHFAVQLVLLLGYCDVILGGRYDGATQI 120
SD+LVV G YL ER H V + ++ G C ++L G D T +
Sbjct: 741 SDILVVLGHYL---ERVQHRGVGMAIVRGLCRLVLRGHVDDRTDV 782
>AE013599-1638|AAS64861.1| 743|Drosophila melanogaster CG17054-PE,
isoform E protein.
Length = 743
Score = 35.9 bits (79), Expect = 0.066
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 254 SDVLVVFGAYLAKLERAAHFAVQLVLLLGYCDVILGGRYDGATQI 120
SD+LVV G YL ER H V + ++ G C ++L G D T +
Sbjct: 331 SDILVVLGHYL---ERVQHRGVGMAIVRGLCRLVLRGHVDDRTDV 372
>AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-PB,
isoform B protein.
Length = 1346
Score = 35.9 bits (79), Expect = 0.066
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 254 SDVLVVFGAYLAKLERAAHFAVQLVLLLGYCDVILGGRYDGATQI 120
SD+LVV G YL ER H V + ++ G C ++L G D T +
Sbjct: 741 SDILVVLGHYL---ERVQHRGVGMAIVRGLCRLVLRGHVDDRTDV 782
>AE013599-1636|AAS64859.1| 1155|Drosophila melanogaster CG17054-PD,
isoform D protein.
Length = 1155
Score = 35.9 bits (79), Expect = 0.066
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 254 SDVLVVFGAYLAKLERAAHFAVQLVLLLGYCDVILGGRYDGATQI 120
SD+LVV G YL ER H V + ++ G C ++L G D T +
Sbjct: 741 SDILVVLGHYL---ERVQHRGVGMAIVRGLCRLVLRGHVDDRTDV 782
>AE013599-1635|AAS64858.1| 1155|Drosophila melanogaster CG17054-PC,
isoform C protein.
Length = 1155
Score = 35.9 bits (79), Expect = 0.066
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 254 SDVLVVFGAYLAKLERAAHFAVQLVLLLGYCDVILGGRYDGATQI 120
SD+LVV G YL ER H V + ++ G C ++L G D T +
Sbjct: 741 SDILVVLGHYL---ERVQHRGVGMAIVRGLCRLVLRGHVDDRTDV 782
>AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-PA,
isoform A protein.
Length = 1153
Score = 35.9 bits (79), Expect = 0.066
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 254 SDVLVVFGAYLAKLERAAHFAVQLVLLLGYCDVILGGRYDGATQI 120
SD+LVV G YL ER H V + ++ G C ++L G D T +
Sbjct: 741 SDILVVLGHYL---ERVQHRGVGMAIVRGLCRLVLRGHVDDRTDV 782
>AY069290-1|AAL39435.1| 299|Drosophila melanogaster GM14467p
protein.
Length = 299
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 239 RQGHQIEPCGHLLCTPCLTAW 301
R + PCGH+ C CL W
Sbjct: 253 RSDSSLTPCGHIFCWSCLLEW 273
>AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-PA
protein.
Length = 2072
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/97 (21%), Positives = 36/97 (37%)
Frame = +1
Query: 148 PRITSQ*PKSNTSCTAKWAARSSFARYAPKTTRTSDRAVRASLVHALSHCVAN*FRRQGC 327
P + S P + +C + + PK A AS+ + ++ A+ GC
Sbjct: 602 PLVQSDLPDTTDTCQQPVLFQEQAKKQRPKLANKQSTATPASIANDVAEAAAS-----GC 656
Query: 328 PFCRAEIKGTEQVVVDAFVPPRPPNTTSEAKNPKPTV 438
P +G V P PP+ ++ K+ K V
Sbjct: 657 PGVSILSRGQSMVTPAGPSTPPPPSRVAQQKSTKSIV 693
>AE014296-2478|AAN11788.1| 164|Drosophila melanogaster CG32847-PB
protein.
Length = 164
Score = 29.9 bits (64), Expect = 4.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 242 QGHQIEPCGHLLCTPCLTAW 301
Q + CGHL C PCL W
Sbjct: 26 QNAVVSMCGHLFCWPCLYQW 45
>AE014296-286|AAF47512.1| 299|Drosophila melanogaster CG7864-PA
protein.
Length = 299
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 239 RQGHQIEPCGHLLCTPCLTAW 301
R + PCGH+ C CL W
Sbjct: 253 RSDSSLTPCGHIFCWSCLLEW 273
>AY060297-1|AAL25336.1| 277|Drosophila melanogaster GH14055p
protein.
Length = 277
Score = 29.5 bits (63), Expect = 5.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 254 IEPCGHLLCTPCLTAW 301
+ CGHL C PCL W
Sbjct: 137 VSMCGHLFCWPCLHQW 152
>AE014298-2232|AAN09365.1| 224|Drosophila melanogaster CG32581-PA
protein.
Length = 224
Score = 29.5 bits (63), Expect = 5.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 254 IEPCGHLLCTPCLTAW 301
+ CGHL C PCL W
Sbjct: 137 VSMCGHLFCWPCLHQW 152
>AE014298-2231|AAS65350.1| 277|Drosophila melanogaster CG8974-PE,
isoform E protein.
Length = 277
Score = 29.5 bits (63), Expect = 5.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 254 IEPCGHLLCTPCLTAW 301
+ CGHL C PCL W
Sbjct: 137 VSMCGHLFCWPCLHQW 152
>AE014298-2230|AAS65349.1| 277|Drosophila melanogaster CG8974-PD,
isoform D protein.
Length = 277
Score = 29.5 bits (63), Expect = 5.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 254 IEPCGHLLCTPCLTAW 301
+ CGHL C PCL W
Sbjct: 137 VSMCGHLFCWPCLHQW 152
>AE014298-2229|AAF48517.1| 277|Drosophila melanogaster CG8974-PC,
isoform C protein.
Length = 277
Score = 29.5 bits (63), Expect = 5.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 254 IEPCGHLLCTPCLTAW 301
+ CGHL C PCL W
Sbjct: 137 VSMCGHLFCWPCLHQW 152
>AE014298-2228|AAG22354.2| 277|Drosophila melanogaster CG8974-PB,
isoform B protein.
Length = 277
Score = 29.5 bits (63), Expect = 5.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 254 IEPCGHLLCTPCLTAW 301
+ CGHL C PCL W
Sbjct: 137 VSMCGHLFCWPCLHQW 152
>AE014298-2227|AAG22355.2| 277|Drosophila melanogaster CG8974-PA,
isoform A protein.
Length = 277
Score = 29.5 bits (63), Expect = 5.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 254 IEPCGHLLCTPCLTAW 301
+ CGHL C PCL W
Sbjct: 137 VSMCGHLFCWPCLHQW 152
>AY051695-1|AAK93119.1| 807|Drosophila melanogaster LD24014p
protein.
Length = 807
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 510 GSGNAANGWSSRSAATFNGLADDIDDGERHRR 605
G+GN +NG+S+ A +FN D G+R RR
Sbjct: 744 GNGNGSNGFSNNGAESFND-RDRGGGGQRRRR 774
>AE014297-325|AAN13257.1| 807|Drosophila melanogaster CG1109-PB,
isoform B protein.
Length = 807
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 510 GSGNAANGWSSRSAATFNGLADDIDDGERHRR 605
G+GN +NG+S+ A +FN D G+R RR
Sbjct: 744 GNGNGSNGFSNNGAESFND-RDRGGGGQRRRR 774
>AE014297-324|AAF51974.2| 807|Drosophila melanogaster CG1109-PA,
isoform A protein.
Length = 807
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 510 GSGNAANGWSSRSAATFNGLADDIDDGERHRR 605
G+GN +NG+S+ A +FN D G+R RR
Sbjct: 744 GNGNGSNGFSNNGAESFND-RDRGGGGQRRRR 774
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,116,027
Number of Sequences: 53049
Number of extensions: 693838
Number of successful extensions: 2600
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2590
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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