Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021276
(756 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7JUR6 Cluster: GH03014p; n=11; Endopterygota|Rep: GH03... 113 6e-24
UniRef50_UPI0000E4A9AF Cluster: PREDICTED: similar to LOC495186 ... 79 1e-13
UniRef50_A7T167 Cluster: Predicted protein; n=1; Nematostella ve... 74 4e-12
UniRef50_Q9NXN4 Cluster: Ganglioside-induced differentiation-ass... 69 9e-11
UniRef50_UPI0000660739 Cluster: ganglioside induced differentiat... 64 4e-09
UniRef50_Q4T065 Cluster: Chromosome undetermined SCAF11328, whol... 64 4e-09
UniRef50_Q54TH9 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q94JV1 Cluster: At1g69340/F10D13.28; n=9; Magnoliophyta... 58 3e-07
UniRef50_Q5D8J0 Cluster: SJCHGC04791 protein; n=1; Schistosoma j... 49 1e-04
UniRef50_Q54PT1 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_Q6INW3 Cluster: MGC80175 protein; n=3; Xenopus|Rep: MGC... 46 0.001
UniRef50_Q23130 Cluster: Putative uncharacterized protein rga-1;... 46 0.001
UniRef50_A6ZJ91 Cluster: Rho GTPase activating protein 8; n=2; H... 44 0.003
UniRef50_Q9NSG0 Cluster: Rho GTPase-activating protein 8; n=41; ... 44 0.003
UniRef50_UPI000051A8D7 Cluster: PREDICTED: similar to Rho GTPase... 43 0.009
UniRef50_Q07960 Cluster: Rho GTPase-activating protein 1; n=30; ... 39 0.12
UniRef50_Q0IFV0 Cluster: Bcl2/adenovirus E1b 19-kDa protein-inte... 36 1.1
UniRef50_A5VYW3 Cluster: Biotin carboxylase-like protein; n=1; P... 34 4.4
UniRef50_Q10RP7 Cluster: Appr-1-p processing enzyme family prote... 34 4.4
UniRef50_Q9VZJ4 Cluster: CG11593-PA; n=3; Diptera|Rep: CG11593-P... 34 4.4
UniRef50_UPI0000E460AA Cluster: PREDICTED: similar to GAP-relate... 33 5.8
UniRef50_A2VSU2 Cluster: NAD/NADP transhydrogenase beta subunit;... 33 5.8
UniRef50_Q3JWJ0 Cluster: Putative uncharacterized protein; n=2; ... 33 7.6
UniRef50_Q86ZH1 Cluster: Related to CELL DIVISION CYCLE 2-RELATE... 33 7.6
>UniRef50_Q7JUR6 Cluster: GH03014p; n=11; Endopterygota|Rep:
GH03014p - Drosophila melanogaster (Fruit fly)
Length = 540
Score = 113 bits (271), Expect = 6e-24
Identities = 51/80 (63%), Positives = 59/80 (73%)
Frame = +2
Query: 515 EDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGDIDXXXXXXXXXXXXDPIVRGDYVI 694
EDL+EVSGIGCLYQSGVDRLGRPV+VF GK FP +ID DPIV+GDYVI
Sbjct: 373 EDLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGDYVI 432
Query: 695 AYFHTLASSANHPPFSWLKE 754
+YFHTL S+ N+P WL+E
Sbjct: 433 SYFHTLTSTNNYPSLHWLRE 452
>UniRef50_UPI0000E4A9AF Cluster: PREDICTED: similar to LOC495186
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495186 protein -
Strongylocentrotus purpuratus
Length = 1058
Score = 79.0 bits (186), Expect = 1e-13
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = +2
Query: 509 KSEDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGDIDXXXXXXXXXXXXDPIVRGDY 688
+ EDLS+++ C+Y +G D GRP++ F+ + FP ID D IV DY
Sbjct: 885 RQEDLSDIAAHRCIYATGHDIHGRPIIAFVARNFPAHSIDLNKVLLYVIHLLDSIVNQDY 944
Query: 689 VIAYFHTLASSANHPPFSWLKE 754
V+ YFHT++S+ N P SWLK+
Sbjct: 945 VVVYFHTMSSADNQPELSWLKD 966
>UniRef50_A7T167 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 502
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/82 (43%), Positives = 48/82 (58%)
Frame = +2
Query: 509 KSEDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGDIDXXXXXXXXXXXXDPIVRGDY 688
++E+ ++ S LYQSGVD LGRPVVVF+ + F + D D IV DY
Sbjct: 329 RTENFADFSRQKILYQSGVDFLGRPVVVFVARHFTAQNTDLGKAVAYFISVLDRIVNRDY 388
Query: 689 VIAYFHTLASSANHPPFSWLKE 754
V+ YFHT ++ N PP S+LKE
Sbjct: 389 VVVYFHTHSTEENQPPMSFLKE 410
>UniRef50_Q9NXN4 Cluster: Ganglioside-induced
differentiation-associated protein 2; n=28;
Euteleostomi|Rep: Ganglioside-induced
differentiation-associated protein 2 - Homo sapiens
(Human)
Length = 497
Score = 69.3 bits (162), Expect = 9e-11
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = +2
Query: 509 KSEDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGDIDXXXXXXXXXXXXDPIVRGDY 688
+SEDLS+++ + LYQ+GVD GR V+V +G+ P+ ID D I +Y
Sbjct: 327 RSEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEY 386
Query: 689 VIAYFHTLASSANHPPFSWLKE 754
V+ YFHTL S NH +LK+
Sbjct: 387 VLVYFHTLTSEYNHLDSDFLKK 408
>UniRef50_UPI0000660739 Cluster: ganglioside induced differentiation
associated protein 2; n=1; Takifugu rubripes|Rep:
ganglioside induced differentiation associated protein 2
- Takifugu rubripes
Length = 529
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +2
Query: 509 KSEDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGDIDXXXXXXXXXXXXDPIVRGDY 688
++EDLS+++ + LYQ+GVD GR +V +G+ P+ +D D I +Y
Sbjct: 374 RAEDLSDIAALKALYQTGVDMCGRTAMVVVGRNIPVTLLDLEKALLYFIHVMDHITAKEY 433
Query: 689 VIAYFHTLASSANHPPFSWLK 751
V+ YFHTL + NH +LK
Sbjct: 434 VMVYFHTLTAEHNHLDSEFLK 454
>UniRef50_Q4T065 Cluster: Chromosome undetermined SCAF11328, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF11328,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 566
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +2
Query: 509 KSEDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGDIDXXXXXXXXXXXXDPIVRGDY 688
++EDLS+++ + LYQ+GVD GR V+V +G+ P+ +D D I +Y
Sbjct: 411 RAEDLSDIAALKALYQTGVDMCGRTVMVVVGRNIPVTLLDPEKALLYFIHVMDHITAKEY 470
Query: 689 VIAYFHTLASSANH 730
V+ YFHTL + NH
Sbjct: 471 VMVYFHTLTAEHNH 484
>UniRef50_Q54TH9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 721
Score = 64.1 bits (149), Expect = 4e-09
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +2
Query: 509 KSEDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGDIDXXXXXXXXXXXXDPIVRGDY 688
KS+ E+ + +Y +G D LGR ++V I P+ ++D DP+V +Y
Sbjct: 363 KSQRFPEIEALNFIYPAGKDNLGRTIIVIIASHLPVREMDMERVLLYTISIMDPVVEEEY 422
Query: 689 VIAYFHTLASSANHPPFSWLKE 754
V+ Y HT +++N P +W+K+
Sbjct: 423 VLVYVHTNMNNSNKPSMAWMKK 444
>UniRef50_Q94JV1 Cluster: At1g69340/F10D13.28; n=9;
Magnoliophyta|Rep: At1g69340/F10D13.28 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 562
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +2
Query: 500 ASCKSEDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGDIDXXXXXXXXXXXXDPIVR 679
A S +LSE++ + +Y+ GVD G PV+V +G F + +D +P+++
Sbjct: 384 AKANSINLSEIAEMKIVYRGGVDTEGHPVMVVVGAHFLLRCLDLERFVLYVIKEFEPVIQ 443
Query: 680 GDYVIAYFHTLASSANHPPFSWLK 751
Y I YFH+ AS P W+K
Sbjct: 444 KPYSIVYFHSAASLQVQPDLGWMK 467
>UniRef50_Q5D8J0 Cluster: SJCHGC04791 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04791 protein - Schistosoma
japonicum (Blood fluke)
Length = 228
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 518 DLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGD-IDXXXXXXXXXXXXDPIVRGDYVI 694
D ++S +G L +G D+LGR V+VF P D ID + V DY +
Sbjct: 147 DYPDISRLGVLQGAGDDKLGRKVIVFSACRLPASDLIDHQHLLTYITKTLEQYVSIDYCL 206
Query: 695 AYFHTLASSANHPPFSW 745
YFH ++ N P F W
Sbjct: 207 IYFHFGLTNKNRPKFKW 223
>UniRef50_Q54PT1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 568
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 509 KSEDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIG-DIDXXXXXXXXXXXXDPIVRGD 685
K EDLS+VS + Q+ D+ RP+VV IG D+ I RG+
Sbjct: 397 KVEDLSDVSRLNFTLQTTDDQ-NRPIVVIIGSQLNSRKDLYDQVLLYLIRVLEQTIQRGN 455
Query: 686 YVIAYFHTLASSANHPPFSWLKE 754
+ I YFH+ SS P SWLK+
Sbjct: 456 FSIIYFHSNMSSQQSPDLSWLKK 478
>UniRef50_Q6INW3 Cluster: MGC80175 protein; n=3; Xenopus|Rep:
MGC80175 protein - Xenopus laevis (African clawed frog)
Length = 420
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 491 KTAASCKSEDLSEVSGIGCLYQSGVDRLGRPVVVF-IGKXFPIGDIDXXXXXXXXXXXXD 667
KT+ C +++ G ++ G D GR V+ F + P +ID D
Sbjct: 34 KTSDVCIGHPYYDIARHGIIHVVGDDNSGRKVITFSCCRLPPCHEIDHVRLLEYMKHTLD 93
Query: 668 PIVRGDYVIAYFHTLASSANHPPFSWLK 751
V DY + YFH +S N P SWL+
Sbjct: 94 QYVENDYTLVYFHYGLNSRNKPSLSWLQ 121
>UniRef50_Q23130 Cluster: Putative uncharacterized protein rga-1;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein rga-1 - Caenorhabditis elegans
Length = 444
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 566 DRLGRPVVVFIGKXFPIG-DIDXXXXXXXXXXXXDPIVRGDYVIAYFHTLASSANHPPFS 742
DR+GRP+VV P +ID D IV DY I YFH S N PP
Sbjct: 89 DRVGRPIVVVYAYRLPSSKEIDHARLLQYLVQIIDKIVDQDYTIVYFHYGLRSHNKPPVR 148
Query: 743 WL 748
WL
Sbjct: 149 WL 150
>UniRef50_A6ZJ91 Cluster: Rho GTPase activating protein 8; n=2; Homo
sapiens|Rep: Rho GTPase activating protein 8 - Homo
sapiens (Human)
Length = 197
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 512 SEDLSEVSGIGCLYQSGVDRLGRPVVVF-IGKXFPIGDIDXXXXXXXXXXXXDPIVRGDY 688
S +V+ G L +G DR GR VV F + P ++D D V DY
Sbjct: 11 SHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQYVENDY 70
Query: 689 VIAYFHTLASSANHPPFSWLK 751
I YFH +S N P WL+
Sbjct: 71 TIVYFHYGLNSRNKPSLGWLQ 91
>UniRef50_Q9NSG0 Cluster: Rho GTPase-activating protein 8; n=41;
Euteleostomi|Rep: Rho GTPase-activating protein 8 - Homo
sapiens (Human)
Length = 718
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 512 SEDLSEVSGIGCLYQSGVDRLGRPVVVF-IGKXFPIGDIDXXXXXXXXXXXXDPIVRGDY 688
S +V+ G L +G DR GR VV F + P ++D D V DY
Sbjct: 265 SHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQYVENDY 324
Query: 689 VIAYFHTLASSANHPPFSWLK 751
I YFH +S N P WL+
Sbjct: 325 TIVYFHYGLNSRNKPSLGWLQ 345
>UniRef50_UPI000051A8D7 Cluster: PREDICTED: similar to Rho GTPase
activating protein 1; n=3; Endopterygota|Rep: PREDICTED:
similar to Rho GTPase activating protein 1 - Apis
mellifera
Length = 496
Score = 42.7 bits (96), Expect = 0.009
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +2
Query: 515 EDLSEVSGIGCLYQSGVDRLGRPVVVFIG-KXFPIGD--IDXXXXXXXXXXXXDPIVRGD 685
ED ++S G + G D GR V+V K P+G + D V D
Sbjct: 122 EDYLDISRYGIVEVVGDDNAGRKVIVVSACKLPPVGKETFNYAKLLRYLTHTLDTFVEQD 181
Query: 686 YVIAYFHTLASSANHPPFSWL 748
Y + YFH +S N PP SWL
Sbjct: 182 YSLVYFHYGLTSKNKPPLSWL 202
>UniRef50_Q07960 Cluster: Rho GTPase-activating protein 1; n=30;
Euteleostomi|Rep: Rho GTPase-activating protein 1 - Homo
sapiens (Human)
Length = 439
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 557 SGVDRLGRPVVVFIGKXFPIG-DIDXXXXXXXXXXXXDPIVRGDYVIAYFHTLASSANHP 733
+G D+ GR ++VF P +D D V DY + Y H +S N P
Sbjct: 76 AGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHGLTSDNKP 135
Query: 734 PFSWLKE 754
SWL++
Sbjct: 136 SLSWLRD 142
>UniRef50_Q0IFV0 Cluster: Bcl2/adenovirus E1b 19-kDa
protein-interacting protein; n=1; Aedes aegypti|Rep:
Bcl2/adenovirus E1b 19-kDa protein-interacting protein -
Aedes aegypti (Yellowfever mosquito)
Length = 495
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 665 DPIVRGDYVIAYFHTLASSANHPPFSWLKE 754
+ +V DYV+ Y H +S N PPF WLK+
Sbjct: 429 EQLVTEDYVLVYLHGGSSRGNVPPFPWLKK 458
>UniRef50_A5VYW3 Cluster: Biotin carboxylase-like protein; n=1;
Pseudomonas putida F1|Rep: Biotin carboxylase-like
protein - Pseudomonas putida F1
Length = 410
Score = 33.9 bits (74), Expect = 4.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 637 GTPVPDQTPGSDRARRLRDRVLSHAGLVGEPSALLVAQ 750
G V PGSD A R+ DR+ +H GL G P +A+
Sbjct: 71 GRAVRAVIPGSDSALRISDRLAAHLGLAGNPVPTCLAR 108
>UniRef50_Q10RP7 Cluster: Appr-1-p processing enzyme family protein,
expressed; n=3; Magnoliophyta|Rep: Appr-1-p processing
enzyme family protein, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 460
Score = 33.9 bits (74), Expect = 4.4
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
Frame = +2
Query: 551 YQSGVDRLGRPVVVFIGKXFPIGDID------------XXXXXXXXXXXXDPIVRGDYVI 694
Y+ GVD GRPV+V +G F + +D +P+++ Y I
Sbjct: 277 YRGGVDSEGRPVMVVVGAHFLLRCLDLERFILYVVKLILTGLNLPSLQEFEPLIQKPYSI 336
Query: 695 AYFHTLASSANHPPFSWLK 751
YFH+ AS P ++K
Sbjct: 337 VYFHSAASLQVRPDLGFMK 355
>UniRef50_Q9VZJ4 Cluster: CG11593-PA; n=3; Diptera|Rep: CG11593-PA -
Drosophila melanogaster (Fruit fly)
Length = 505
Score = 33.9 bits (74), Expect = 4.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 665 DPIVRGDYVIAYFHTLASSANHPPFSWLK 751
+ +V DYV+ Y H ++ N PPF WLK
Sbjct: 400 EQLVTDDYVLIYLHGGSNRRNVPPFPWLK 428
>UniRef50_UPI0000E460AA Cluster: PREDICTED: similar to GAP-related
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to GAP-related protein -
Strongylocentrotus purpuratus
Length = 2248
Score = 33.5 bits (73), Expect = 5.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 515 EDLSEVSGIGCLYQSGVDRLGRPVVVFIGKXFPIGDID 628
ED + + YQ G+ R G PV ++ + + +ID
Sbjct: 986 EDFKRLKSLNIFYQDGISRAGNPVFYYVARKYKCSEID 1023
>UniRef50_A2VSU2 Cluster: NAD/NADP transhydrogenase beta subunit;
n=1; Burkholderia cenocepacia PC184|Rep: NAD/NADP
transhydrogenase beta subunit - Burkholderia cenocepacia
PC184
Length = 494
Score = 33.5 bits (73), Expect = 5.8
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 VRRPERGIWDRMSVSERRGSTGS-ARGRLHREXVPHRGHRLGKGT-PVPDQTPGSDRARR 684
VR+P R + + + G R + + VP R G+ P PDQ DR R
Sbjct: 146 VRQPRRAVHRHVRRRDHVLRVGDRVRQAVGQVQVPAVSGRAGRVCRPAPDQPDARDRDAR 205
Query: 685 LRDRVLSHAGL 717
LR VL HAG+
Sbjct: 206 LRHPVLHHAGV 216
>UniRef50_Q3JWJ0 Cluster: Putative uncharacterized protein; n=2;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 518
Score = 33.1 bits (72), Expect = 7.6
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 514 RRPERGIWDRMSVSERRGSTGSARG--RLHREXVPHRGHRLGKGTPVPDQTPGSDRARRL 687
RR +RG R+ + ERR G ARG R R P H + G D R L
Sbjct: 89 RRQDRGRRQRLVIGERRQEGGQARGEHRFARARRPDHQHVVA--------ARGGDFERAL 140
Query: 688 RDRVLSHAGLVG 723
R R+ H G +G
Sbjct: 141 RARLADHIGEIG 152
>UniRef50_Q86ZH1 Cluster: Related to CELL DIVISION CYCLE 2-RELATED
PROTEIN KINASE 7; n=2; Pezizomycotina|Rep: Related to
CELL DIVISION CYCLE 2-RELATED PROTEIN KINASE 7 -
Neurospora crassa
Length = 1229
Score = 33.1 bits (72), Expect = 7.6
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +1
Query: 514 RRPERGIWDRMSVSERRGSTGSA-RGRLHREXVPHRGHRLGKGTPVP----DQTPGSDRA 678
R P+RG++DR S RR S RGR R P R H+ + P ++ P SD
Sbjct: 270 RSPDRGVFDRASGRVRRRSPSPRHRGRSDRPDRPERRHQSKSRSRTPPHRENRHPASDAG 329
Query: 679 RRLR 690
R R
Sbjct: 330 SRRR 333
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,308,273
Number of Sequences: 1657284
Number of extensions: 10609501
Number of successful extensions: 24010
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 23332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23998
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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