Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021276
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.6  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   6.1  

>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 589 RLHREXVPHRGHRLGKGTPV 648
           +L  + V H GH+L KG+ V
Sbjct: 384 KLGEDLVTHSGHKLAKGSIV 403


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 642  SAFSKSMSPMGNXFPMKTTTGRP 574
            S  + S +PM    P+ TTT RP
Sbjct: 2290 STMAPSTTPMVPDKPVTTTTSRP 2312


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 96  QFQTLKKNYXXXXXXKDNCNRESRLFDTSV 185
           Q+ +L KN+       +N N +SR+F  +V
Sbjct: 45  QWSSLNKNFQFIDKKLNNRNSKSRVFYENV 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,963
Number of Sequences: 336
Number of extensions: 2689
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)