Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021274
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   101   5e-24
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   101   5e-24
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    92   4e-21
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.8  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  101 bits (243), Expect = 5e-24
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = +3

Query: 573 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 734
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDT
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT 54


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  101 bits (243), Expect = 5e-24
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = +3

Query: 573 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 734
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDT
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT 54


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 92.3 bits (219), Expect = 4e-21
 Identities = 42/54 (77%), Positives = 51/54 (94%)
 Frame = +3

Query: 573 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 734
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDT
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDT 53


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 346 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 471
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 118 LPAREGGDHRQRPGQQDH 171
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 528 TKDAGTISGLNVLRIINEPTAA 593
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 308 CTVASSNLRPMRRLASNICCWGSSPP 231
           CT  + N R  R     I C  ++PP
Sbjct: 14  CTYGNVNYRQRRSQPLKISCLKTTPP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,914
Number of Sequences: 336
Number of extensions: 3982
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)