Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021274
(734 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 144 7e-35
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 140 1e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 4e-33
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 124 1e-28
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 86 3e-17
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 55 5e-08
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 40 0.002
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 31 1.3
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 30 1.7
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.2
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.2
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 5.2
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 28 6.8
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 6.8
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 28 9.0
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 144 bits (349), Expect = 7e-35
Identities = 70/76 (92%), Positives = 73/76 (96%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 686
HDSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+L
Sbjct: 151 HDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVL 210
Query: 687 TIEDGIFEVKSTAGDT 734
TIEDGIFEVKSTAGDT
Sbjct: 211 TIEDGIFEVKSTAGDT 226
Score = 138 bits (335), Expect = 3e-33
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P+ +FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
VLTKMKETAEAYLG V +AV+TVPAYF
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYF 150
Score = 133 bits (321), Expect = 2e-31
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = +2
Query: 59 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVA 238
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DT+RLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 239 MNPNN 253
MNP N
Sbjct: 61 MNPEN 65
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 140 bits (338), Expect = 1e-33
Identities = 64/88 (72%), Positives = 76/88 (86%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P+ IFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
VL KMKETAEAYLG+ V +AVITVPAYF
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYF 150
Score = 136 bits (330), Expect = 1e-32
Identities = 66/77 (85%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 686
+DSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSIL
Sbjct: 151 NDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSIL 210
Query: 687 TIEDG-IFEVKSTAGDT 734
TI+DG +FEVKSTAGDT
Sbjct: 211 TIDDGSLFEVKSTAGDT 227
Score = 128 bits (309), Expect = 5e-30
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = +2
Query: 59 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVA 238
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDT+RL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 239 MNPNN 253
+NP N
Sbjct: 61 LNPEN 65
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 138 bits (334), Expect = 4e-33
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 686
+DSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L
Sbjct: 244 NDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVL 303
Query: 687 TIEDGIFEVKSTAGDT 734
+IEDGIFEVKST GDT
Sbjct: 304 SIEDGIFEVKSTHGDT 319
Score = 131 bits (317), Expect = 5e-31
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = +2
Query: 59 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVA 238
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD +RL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 239 MNPNN 253
MNP N
Sbjct: 61 MNPTN 65
Score = 114 bits (275), Expect = 6e-26
Identities = 64/113 (56%), Positives = 73/113 (64%), Gaps = 25/113 (22%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV--- 414
P IFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 415 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYF 507
SSMVL KMKETAEAYLG V +AV+TVPAYF
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 175
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +1
Query: 409 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 507
++SSMVL KMKETAEAYLG V +AV+TVPAYF
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 243
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 124 bits (298), Expect = 1e-28
Identities = 57/76 (75%), Positives = 70/76 (92%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 686
+D+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+L
Sbjct: 849 NDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLL 907
Query: 687 TIEDGIFEVKSTAGDT 734
TI++G+FEV +T GDT
Sbjct: 908 TIDNGVFEVVATNGDT 923
Score = 118 bits (284), Expect = 5e-27
Identities = 55/88 (62%), Positives = 69/88 (78%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P+ +FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
VLTKMKETAEAYLGK V +AV+TVPAYF
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYF 848
Score = 101 bits (241), Expect = 8e-22
Identities = 46/60 (76%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-DRLIGDAAKNQVAMNPNN 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ +RLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +3
Query: 516 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 695
QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQ 242
Query: 696 DGIFEVKSTAGD 731
G+F + AG+
Sbjct: 243 GGMFVTMAMAGN 254
Score = 68.1 bits (159), Expect = 7e-12
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVA 238
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 239 MNPNN 253
+NP N
Sbjct: 90 INPKN 94
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 420
P+ I+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 421 MVLTKMKETAEAYLGKTVQNAVITVPAYF 507
V+ K++ AE L TV AV++VPA F
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEF 180
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 KRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 444
KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+ T++K
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186
Query: 445 TAEAYLGKTVQNAVITVPAYF 507
TAE L V + VI+VP+Y+
Sbjct: 187 TAEIALKTKVTDCVISVPSYY 207
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +3
Query: 510 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGGGTFDVS 680
D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V
Sbjct: 209 DRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVC 268
Query: 681 ILTIEDGIFEVKSTA 725
I G +V STA
Sbjct: 269 ITAFLKGQLKVLSTA 283
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQ 232
VG D+G + V + G +E +AN+ +R TPS+V+ D RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/48 (52%), Positives = 37/48 (77%)
Frame = +1
Query: 364 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 507
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+F
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHF 49
Score = 50.8 bits (116), Expect = 1e-06
Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 26/70 (37%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLD 614
+D+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLD
Sbjct: 50 NDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLD 109
Query: 615 KK--GTGERN 638
K G ERN
Sbjct: 110 KARGGKAERN 119
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +3
Query: 639 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 734
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDT 33
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 128 GKVEIIANDQGNRTTPSYVAFTDTDRLI 211
G IIAND G+R TP+ VAF+DT++LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFD 674
+ ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G +
Sbjct: 117 NQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTV 176
Query: 675 VSIL 686
+I+
Sbjct: 177 ATIV 180
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 358 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 507
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +F
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFF 116
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 458 ISAKLCRM-QLSRFPRTS*LSKTSHKR-CRYHLRLERSPNH 574
+SAKLC + LS+ R HKR C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 639 VLIFDLGGGTFDVSILTIEDGIFEVK 716
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 458 ISAKLCRM-QLSRFPRTS*LSKTSHKR-CRYHLRLERSPNH 574
+SAKLC + LS+ R HKR C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 137 EIIANDQGNRTTPSYVAFTDTDRLIGD 217
++I N +G+RTTPS VAFT + D
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERLTD 33
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 645 IFDLGGGTFDVSILTIEDGIFEV 713
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 5 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 91
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 733 VSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 620
++PA+ S +PS V +D VP P I+ + VP
Sbjct: 268 LTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 355 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLKDKPQK 534
+PK K + E+ EE +M ++K LGK V+ + T +TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 535 MQ 540
Q
Sbjct: 714 SQ 715
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 713 HLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSSSG 582
H+EDT DG DG E +E K + S SN+ G
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDG 529
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 452 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP 279
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 540 LHLLWLVFESHEVRGNRDNCILHSFAEIS 454
++ LWL F + + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,704,168
Number of Sequences: 59808
Number of extensions: 551230
Number of successful extensions: 1775
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1764
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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