Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021273
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    28   0.069
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   3.4  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 274 ILRMD*YCLSSILFIYSVYVEICYYRSL 357
           +L+ + YC   ILF  SV+V + YY SL
Sbjct: 315 VLKTNKYCNFIILFYLSVFVILVYYASL 342


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 281 EWINIVCLQYYLSIVSMSKFVI 346
           +WIN+V  Q+ L  V  S+F++
Sbjct: 46  QWINLVTQQHGLPEVPSSRFLM 67


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 281 EWINIVCLQYYLSIVSMSKFVI 346
           +WIN+V  Q+ L  V  S+F++
Sbjct: 46  QWINLVTQQHGLPEVPSSRFLM 67


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 589  FISQVSKYFVR*IYYSFNINNVN 521
            +++  S Y +  IY  FN+NNV+
Sbjct: 1009 YVTVPSMYLLLVIYSVFNMNNVS 1031


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 589  FISQVSKYFVR*IYYSFNINNVN 521
            +++  S Y +  IY  FN+NNV+
Sbjct: 1009 YVTVPSMYLLLVIYSVFNMNNVS 1031


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 417 SNLNYKFEHYYGSTYYQKL 361
           SN    FE+YY   Y+ ++
Sbjct: 322 SNFEIGFENYYNILYFSRI 340


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 319 YSVYVEICYYRSL 357
           YS+YV   YYR L
Sbjct: 60  YSIYVRHTYYRRL 72


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 319 YSVYVEICYYRSL 357
           YS+YV   YYR L
Sbjct: 60  YSIYVRHTYYRRL 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,562
Number of Sequences: 336
Number of extensions: 3171
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)