Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021271
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.44 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.44 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.77 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 419 NDEFRQYLGSNPEDVYKEYTKDSY 490
           N++ R+YL  N ++    Y+K++Y
Sbjct: 328 NEQLRKYLCKNEDETKNHYSKNTY 351


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 419 NDEFRQYLGSNPEDVYKEYTKDSY 490
           N++ R+YL  N ++    Y+K++Y
Sbjct: 220 NEQLRKYLCKNEDETKNHYSKNTY 243


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 211 IIFIYNCVYFRFITIQINYKCVKKVANQ*KTLSLLFHYK 95
           I+ + N   F F  I ++++C K      KT  L +H K
Sbjct: 137 IVGVKNASLFIFDLIFLSFRCTKLCKEANKTAFLWYHIK 175


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 277 HSLVRRTDHN*KGNTIFEKGYRHLLLYWYNKKFICTLANCEISN 408
           HS+V  +D    G+  +E  +      W +    CT   CE  N
Sbjct: 659 HSIVDDSDVGPSGDCFYENKFYRQEAQWTSSDNPCTTCFCENGN 702


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 256 FDNRSINNTDILNSLIIFIYNCVYFRFITIQINY 155
           F     +N   L   +IFI+  V+F  I +  NY
Sbjct: 82  FQQFECDNEPKLRHYLIFIFVNVFFWVIILMSNY 115


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 233 VVNASIIKASSLPYDIH 283
           V+N SII  S   Y++H
Sbjct: 275 VINESIIDLSQQTYNVH 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,169
Number of Sequences: 336
Number of extensions: 3106
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)