Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021271
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    24   5.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   5.2  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   5.2  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   6.9  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   9.1  

>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 410 LFEISQFARVQINFLLYQY 354
           L  +S +AR ++N +LYQY
Sbjct: 108 LMSVSSYARDRLNPVLYQY 126


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = +2

Query: 452  PEDVYKEYTKDSYGWSVVNRSLR 520
            PE++ +  + + Y WS+V++++R
Sbjct: 950  PENIIEVMSANRYNWSMVHQAVR 972


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 115 SLLFHYKQLNIIYDGFGVLDTYKRNS 38
           ++L H+ +LN++    G   T+ RNS
Sbjct: 139 AVLEHFSRLNLVLVNVGFCPTFVRNS 164


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 3   IELHISILFLIAEFLL*VSRTPKPSYIIL 89
           + L ISIL  +  FLL VS+   P+ ++L
Sbjct: 264 VTLGISILLSLVVFLLLVSKILPPTSLVL 292


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 374 LFALWQTVKFQIRI-KNDEFRQYLGSNPEDVYKEYTKDSYGW 496
           L A  ++++  IR+ KN+ F ++L S  EDV   + +  + W
Sbjct: 336 LLAARESLRKAIRLSKNEAFDRFLRSIREDVTGIFFRKVFHW 377


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,753
Number of Sequences: 2352
Number of extensions: 12566
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)