Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021269
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    40   6e-05
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   5.1  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   6.8  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   9.0  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    23   9.0  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   9.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 39.9 bits (89), Expect = 6e-05
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +3

Query: 336 EVSVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215



 Score = 27.1 bits (57), Expect = 0.42
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 511 TGSGKTLAYILPAIVH 558
           TGSGKT A++LP I H
Sbjct: 220 TGSGKTAAFMLPMIHH 235


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
 Frame = -3

Query: 235  PNLGDACSDLQRILF----SHQILQILQIYCH 152
            P  GDA  D++ +LF    S +I   +Q  CH
Sbjct: 939  PECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 503 RTKRVPAKRWPT 538
           R +R+PA++WPT
Sbjct: 203 RQQRLPAQQWPT 214


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = +2

Query: 407 CATRCKDNGLQRTDAYSSSRLADSYVWKEFSWRTKRVPAKRWPT 538
           C T  K   +    A  S   A         WR K +P  RW T
Sbjct: 211 CGTGWKYRSISSLHAPPSHPGAHRAAEPRLDWRIKILPLPRWNT 254


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 244 SLQPSTKTFMIHILQFSKDHHMKSKST 324
           SLQP    F++ I+    DH  K++ T
Sbjct: 235 SLQPELIKFVMEIITHQIDHREKNQIT 261


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 288 VLKRSPYEVEEYRNNHEVSVSGVEVHNPIQY 380
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,295
Number of Sequences: 2352
Number of extensions: 9587
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)