Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021269
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 52 2e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 46 2e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 46 2e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 45 4e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 45 4e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 45 4e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 36 0.026
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 35 0.046
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 35 0.046
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 35 0.046
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 34 0.060
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 34 0.060
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 32 0.32
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 32 0.32
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 30 1.3
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 30 1.3
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 30 1.3
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 29 1.7
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 29 2.3
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 2.3
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 2.3
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 28 4.0
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z83239-3|CAB05810.1| 344|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 9.1
U00064-2|AAD31934.2| 329|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 27 9.1
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 27 9.1
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +3
Query: 321 YRNNHEVSVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
+R + +S+ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 501 GV 506
GV
Sbjct: 343 GV 344
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/84 (30%), Positives = 48/84 (57%)
Frame = +3
Query: 255 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVSVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 434
FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 225 FNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSE 284
Query: 435 YKEPTPIQAQGWPIAMSGKNLVGV 506
Y++PTPIQA P A+SG++++G+
Sbjct: 285 YEQPTPIQAMAIPSALSGRDVLGI 308
Score = 31.5 bits (68), Expect = 0.43
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 511 TGSGKTLAYILPAIVH 558
TGSGKT AY+ PAIVH
Sbjct: 311 TGSGKTAAYLWPAIVH 326
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/87 (32%), Positives = 53/87 (60%)
Frame = +3
Query: 246 TPTFNKNFYDPHPTVLKRSPYEVEEYRNNHEVSVSGVEVHNPIQYFEEANFPDYVQQGVK 425
TP K+FY + V +R YE++++ + ++V++ G V P+ F EA P + + +
Sbjct: 88 TP-IEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-LL 145
Query: 426 TMGYKEPTPIQAQGWPIAMSGKNLVGV 506
+++PT IQ+ WPIAMSG++++ +
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISI 172
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +1
Query: 511 TGSGKTLAYILPAIVH 558
TGSGKTLA++LPA+VH
Sbjct: 175 TGSGKTLAFMLPALVH 190
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VSVSGVEVHNPIQYFEEANFPDYVQQGVKTM 431
F KNFY + + + EV+ YR + ++V G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 432 GYKEPTPIQAQGWPIAMSGKNLVGV 506
Y +PT IQAQ P MSG++++G+
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGI 347
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 511 TGSGKTLAYILPAIVH 558
TGSGKTLA++LP H
Sbjct: 350 TGSGKTLAFLLPMFRH 365
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 339 VSVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLM 207
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 PHPTVLKRSPYEVEEYRNNHEVSVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 452
P + ++S + E R +S G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 453 IQAQGWPIAMSGKNLVGV 506
IQ QG P+A+SG++++G+
Sbjct: 216 IQIQGIPVALSGRDMIGI 233
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 330 NHEVSVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLM 180
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 511 TGSGKTLAYILPAIVH 558
TGSGKT A++LP I H
Sbjct: 185 TGSGKTAAFLLPIIQH 200
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 330 NHEVSVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLM 164
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 511 TGSGKTLAYILPAIVH 558
TGSGKT A++LP I H
Sbjct: 169 TGSGKTAAFLLPIIQH 184
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 330 NHEVSVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLM 161
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 511 TGSGKTLAYILPAIVH 558
TGSGKT A++LP I H
Sbjct: 166 TGSGKTAAFLLPIIQH 181
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +3
Query: 348 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 506
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGV 127
Score = 32.3 bits (70), Expect = 0.24
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +1
Query: 511 TGSGKTLAYILPAIVH 558
TGSGKTLA++LPA++H
Sbjct: 130 TGSGKTLAFLLPALLH 145
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.026
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 381 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 497
FE+ N + + GY +PTPIQ P+A++GK++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.046
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 369 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
P + F EAN + +Q+ V GY + TPIQ P+ G +++
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIM 382
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.046
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 369 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
P + F EAN + +Q+ V GY + TPIQ P+ G +++
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIM 382
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.046
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 369 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
P + F EAN + +Q+ V GY + TPIQ P+ G +++
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIM 382
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 369 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
P + F +++ P +++ V+ GY TPIQ P+ GK+++
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDIL 339
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 369 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
P + F +++ P +++ V+ GY TPIQ P+ GK+++
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDIL 339
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 363 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 506
H +++ V + ++ G+ +PTPIQ + P M GK++V +
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAM 67
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 363 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 506
H +++ V + ++ G+ +PTPIQ + P M GK++V +
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAM 67
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 381 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
F EAN + +++ V GY + TPIQ P+ G +++
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIM 593
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 381 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
F EAN + +++ V GY + TPIQ P+ G +++
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIM 593
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 381 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 500
F EAN + +++ V GY + TPIQ P+ G +++
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIM 593
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 511 TGSGKTLAYILPAI 552
TGSGKTLA++LPAI
Sbjct: 114 TGSGKTLAFLLPAI 127
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 511 TGSGKTLAYILPAIVH 558
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = -2
Query: 485 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYRYLVIISVLFDFI 306
R S+RP + +R+ F+ L L+H+ I + +M ++L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 305 W*SFENCRMWIIKVF 261
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 494 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYRYLVIISVLF 315
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 314 D 312
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 494 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYRYLVIISVLF 315
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 314 D 312
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 137 RRIIAEFVASSKFGTTVSTAIIPV 66
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 137 RRIIAEFVASSKFGTTVSTAIIPV 66
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 365 MNLNATYRYLVIISVLFDFIW*SFENCRMWIIKVFVEGW--SETESQSGRRM 216
+N + + R++++ +D IW F NC W I F W S + GRR+
Sbjct: 43 LNTSLSRRHVIMTEEKYDLIWNVFLNC--WFIGSFFGVWINSIFSERFGRRV 92
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 365 MNLNATYRYLVIISVLFDFIW*SFENCRMWIIKVFVEGW--SETESQSGRRM 216
+N + + R++++ +D IW F NC W I F W S + GRR+
Sbjct: 43 LNTSLSRRHVIMTEEKYDLIWNVFLNC--WFIGSFFGVWINSIFSERFGRRV 92
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 443 TDAYSSSRLADSYVWKEFSWRTKRVPAKRWP 535
TDA R+A S++ + T RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>Z83239-3|CAB05810.1| 344|Caenorhabditis elegans Hypothetical
protein T09F5.3 protein.
Length = 344
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/58 (18%), Positives = 26/58 (44%)
Frame = -2
Query: 464 LSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYRYLVIISVLFDFIW*SFE 291
+ L+ + T C + ++ F + I + +TY+ +V+I L ++ +E
Sbjct: 1 MELHELSYMFTKCGFGACFVVNSFFIFLTITSIKRIYSTYKIMVVIFALMGILFAGWE 58
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 399 PDYVQQGVKTMGYKEPTPIQAQGWPIAM 482
P+ V + ++ MG+ EPT IQ+ P A+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAV 190
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 276 PHPTVLKRSPYEVEEYRNNHEVSVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 434
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 276 PHPTVLKRSPYEVEEYRNNHEVSVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 434
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>U00064-2|AAD31934.2| 329|Caenorhabditis elegans Hypothetical
protein ZC155.7 protein.
Length = 329
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 226 PDWDSVSLQPSTKTFMIHILQF-SKDHHMKSKSTEII 333
P+W + + PST+ M + QF + D ++ + E++
Sbjct: 210 PNWAELDVSPSTEISMAQLQQFMNNDREVREREKEVM 246
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +1
Query: 511 TGSGKTLAYILPAIV 555
TGSGKTLA+++P ++
Sbjct: 782 TGSGKTLAFLIPFVI 796
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +1
Query: 511 TGSGKTLAYILPAIV 555
TGSGKTLA+++P ++
Sbjct: 782 TGSGKTLAFLIPFVI 796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,640,423
Number of Sequences: 27780
Number of extensions: 225294
Number of successful extensions: 763
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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