Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021267
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          28   0.18 
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   5.1  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   5.1  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 28.3 bits (60), Expect = 0.18
 Identities = 21/53 (39%), Positives = 24/53 (45%)
 Frame = +1

Query: 253 AMLRLGAAPDARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGET 411
           A+L  GA     D  GNTPLH     N  P  V   LL  G  +D  N +G T
Sbjct: 802 ALLGAGAKLHYCDYRGNTPLHRAVVEN-VPDMVRLLLLQGGLRLDCTNDDGLT 853



 Score = 27.9 bits (59), Expect = 0.24
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 304 TPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETP 414
           T LHL    N  P  +V+ LL  GA +   +Y G TP
Sbjct: 786 TGLHLAVSCNSEP--IVKALLGAGAKLHYCDYRGNTP 820


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 408 NSRRDPQIHAADPHQHRQSAPVHHPQ 485
           +S+R P  H     Q+ Q  P HH Q
Sbjct: 20  SSQRSPFHHHHQQQQNHQRMPHHHQQ 45


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = -2

Query: 188 VERVVPQLAARPSALGSVRNRHRPLEIYRPWPVSIASK 75
           + +V+P++  +P    +V   + P+E+ +P+PV +  K
Sbjct: 212 IYKVIPKVIEKPVPY-TVEKPY-PIEVEKPFPVEVLKK 247


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,291
Number of Sequences: 2352
Number of extensions: 8684
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)