Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021267
(555 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26210.1 68415.m03147 ankyrin repeat family protein contains ... 40 0.001
At5g13530.1 68418.m01562 protein kinase family protein / ankyrin... 36 0.014
At3g58760.1 68416.m06549 ankyrin protein kinase, putative simila... 36 0.018
At3g09890.1 68416.m01179 ankyrin repeat family protein contains ... 35 0.042
At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyri... 34 0.055
At2g25600.1 68415.m03066 potassium channel protein, putative sim... 34 0.073
At5g37500.1 68418.m04516 guard cell outward rectifying K+ channe... 33 0.097
At4g03460.1 68417.m00473 ankyrin repeat family protein contains ... 33 0.17
At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 32 0.30
At4g22200.1 68417.m03209 potassium channel protein 2 (AKT2) (AKT... 31 0.39
At2g31820.1 68415.m03886 ankyrin repeat family protein contains ... 31 0.52
At5g02620.1 68418.m00198 ankyrin repeat family protein contains ... 31 0.68
At1g03670.1 68414.m00346 ankyrin repeat family protein contains ... 31 0.68
At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) / po... 30 0.90
At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / AC... 29 2.1
At4g03450.1 68417.m00472 ankyrin repeat family protein contains ... 29 2.1
At5g03670.1 68418.m00326 expressed protein 28 3.6
At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar... 28 3.6
At2g31800.1 68415.m03882 ankyrin protein kinase, putative simila... 28 4.8
At1g14000.1 68414.m01652 protein kinase family protein / ankyrin... 28 4.8
At2g24600.3 68415.m02939 ankyrin repeat family protein contains ... 27 6.4
At2g24600.2 68415.m02938 ankyrin repeat family protein contains ... 27 6.4
At2g24600.1 68415.m02937 ankyrin repeat family protein contains ... 27 6.4
At1g05640.1 68414.m00585 ankyrin repeat family protein contains ... 27 6.4
At5g54710.1 68418.m06813 ankyrin repeat family protein contains ... 27 8.4
At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein ... 27 8.4
At4g03500.1 68417.m00477 ankyrin repeat family protein contains ... 27 8.4
At2g07750.1 68415.m01003 DEAD box RNA helicase, putative similar... 27 8.4
>At2g26210.1 68415.m03147 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 190
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 256 MLRLGAAPDARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETPEEILKST 435
+L+ G + RD G + LHL N D+ L++HGA ++ N +GETP + +T
Sbjct: 121 LLKEGVDANYRDRQGMSVLHLAVLFNQ--TDIALMLMDHGASLEYKNAQGETPLDCAPAT 178
Query: 436 QQ 441
Q
Sbjct: 179 LQ 180
>At5g13530.1 68418.m01562 protein kinase family protein / ankyrin
repeat family protein contains similarity to
ankyrin-related gene UNC-44 gi|790608|gb|AAA85854;
contains Pfam domains PF00023: Ankyrin repeat and
PF00069: Protein kinase domain
Length = 834
Score = 36.3 bits (80), Expect = 0.014
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +1
Query: 280 DARDADGNTPLHLVCKLNPCPADVVRELLNHG-AHIDTVNYEGETP 414
+A++ADG + LHL C+ A++V +L +G A++D V+ +G+ P
Sbjct: 505 EAQNADGQSALHLACRRG--SAELVEAILEYGEANVDIVDKDGDPP 548
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 256 MLRLGAAPDARDADGNTP-LHLVCKLNPCPADVVRELLNHGAHIDTVNYEGET 411
+++ GA +R +G+ P + VC + P D +RELL GA + V+ EGET
Sbjct: 564 LIKKGANVRSRLREGSGPSVAHVCSYHGQP-DCMRELLVAGADPNAVDDEGET 615
>At3g58760.1 68416.m06549 ankyrin protein kinase, putative similar
to ankyrin-kinase [Medicago truncatula]
gi|18700701|gb|AAL78674
Length = 471
Score = 35.9 bits (79), Expect = 0.018
Identities = 22/53 (41%), Positives = 26/53 (49%)
Frame = +1
Query: 256 MLRLGAAPDARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETP 414
ML G D RD D T LH+ DVV LL+ GA +DT + G TP
Sbjct: 68 MLDSGTNVDYRDIDARTALHVAACQGR--TDVVELLLSRGAKVDTKDRWGSTP 118
>At3g09890.1 68416.m01179 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 206
Score = 34.7 bits (76), Expect = 0.042
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 280 DARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETPEEI 423
+ D +G+TPLH + DVVR LL GA T N G+TP E+
Sbjct: 140 ETADIEGDTPLHHAARGEH--VDVVRFLLGSGASPTTQNSYGKTPGEL 185
>At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00023
ankyrin repeat, PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 481
Score = 34.3 bits (75), Expect = 0.055
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 256 MLRLGAAPDARDADGNTPLHLVC--KLNPCPADVVRELLNHGAHIDTVNYEGETPEEILK 429
+L GA +A+ ++G TPLHL + V+ LL+H A + EG TP + L
Sbjct: 106 LLESGAFIEAKASNGMTPLHLAVWYSITAKEISTVKTLLDHNADCSAKDNEGMTPLDHLP 165
Query: 430 STQ 438
Q
Sbjct: 166 QGQ 168
>At2g25600.1 68415.m03066 potassium channel protein, putative
similar to potassium channel [Lycopersicon esculentum]
GI:8980432; member of the 1 pore, 6 transmembrane
(1P/6TM- Shaker-type) K+ channel family, PMID:11500563;
Shaker Pollen Inward K+ Channel (SPIK) PMID:11825875
Length = 888
Score = 33.9 bits (74), Expect = 0.073
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 256 MLRLGAAPDARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETP 414
+LR G++P+ D DG T LH+ V+ LL HGA + + EG P
Sbjct: 563 LLRRGSSPNEMDKDGRTALHIAASKGSHYCVVL--LLEHGADPNIRDSEGNVP 613
>At5g37500.1 68418.m04516 guard cell outward rectifying K+ channel
(GORK) identical to guard cell outward rectifying K+
channel [Arabidopsis thaliana] gi|11414742|emb|CAC17380;
member of the 1 pore, 6 transmembrane (1P/6TM) Shaker K+
channel family, PMID:11500563
Length = 820
Score = 33.5 bits (73), Expect = 0.097
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 253 AMLRLGAAPDARDADGNTPLHL-VCKLNPCPADVVRELLNHGAHIDTVNYEGETP-EEIL 426
+++R GA P+ D DG +PLHL C+ D+ L+ G ++ + G TP E +
Sbjct: 549 SLIRSGADPNKTDYDGRSPLHLAACR---GYEDITLFLIQEGVDVNLKDKFGHTPLFEAV 605
Query: 427 KSTQQTLTSIV 459
K+ Q+ + ++
Sbjct: 606 KAGQEGVIGLL 616
>At4g03460.1 68417.m00473 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 677
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +1
Query: 289 DADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETPEEILKSTQQTLTSIVNPL 468
DA+GNTPLHL K N P V ++ + T+N++G T +I + + + L
Sbjct: 420 DANGNTPLHLATK-NWHPKVVSMLTWDNRVDLKTLNHDGVTALDIAEKNMDSSYTFFERL 478
Query: 469 RYTTL 483
+ L
Sbjct: 479 TWMAL 483
>At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2)
identical to acyl-CoA binding protein 2 [Arabidopsis
thaliana] gi|12039034|gb|AAG46057
Length = 354
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 268 GAAPDARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETP 414
G +ARD++G TPLH ++ ++ + L++ A ++ + EG+TP
Sbjct: 256 GIPVNARDSEGRTPLHWA--IDRGHLNIAKVLVDKNADVNAKDNEGQTP 302
>At4g22200.1 68417.m03209 potassium channel protein 2 (AKT2) (AKT3)
identical to potassium channel [Arabidopsis thaliana]
gi|1100898|gb|AAA97865; Note: also identical to AKT3
[Arabidopsis thaliana] gi|1172218|gb|AAA96153, which is
a truncated version of AKT2, PMID:10852932; member of
the 1 pore, 6 transmembrane (1P/6TM- Shaker-type) K+
channel family, PMID:11500563; identical to cDNA
inward-rectifying K+ channel (AKT3) GI:1172219
Length = 802
Score = 31.5 bits (68), Expect = 0.39
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 256 MLRLGAAPDARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGET 411
+L+ +PD D+ G TPLH+ D V LL HG +I + G +
Sbjct: 560 LLKAKLSPDITDSKGKTPLHVAASRG--YEDCVLVLLKHGCNIHIRDVNGNS 609
>At2g31820.1 68415.m03886 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 662
Score = 31.1 bits (67), Expect = 0.52
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 271 AAPDARDADGNTPLHLVCKLNPCPADVVRELLN-HGAHIDTVNYEGETPEEIL-KSTQQT 444
A D GNTPLH+ N +VR L++ G +++ +N G+TP ++ K
Sbjct: 351 AVLSVEDNKGNTPLHIA--TNKGRIKIVRCLVSFEGINLNPINKAGDTPLDVSEKIGNAE 408
Query: 445 LTSIVNPLRYTTLKCL 492
L S++ T K L
Sbjct: 409 LVSVLKEAGAATAKDL 424
>At5g02620.1 68418.m00198 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 524
Score = 30.7 bits (66), Expect = 0.68
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 GAAPDARDADGNTPLHLVCKLNPCPADVVRELLNH-GAHIDTVNYEGETPEEILKST 435
G+ ++ D GNTPLH+ + N A++V+ +L + VN GET +I + T
Sbjct: 217 GSLINSADNKGNTPLHIAVRKN--RAEIVQTVLKYCEVSRVAVNKSGETALDIAEKT 271
>At1g03670.1 68414.m00346 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 616
Score = 30.7 bits (66), Expect = 0.68
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 286 RDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETPEEILKS 432
+D +GNTPLHL K + P V N G ++ +N EG T +I ++
Sbjct: 353 QDINGNTPLHLATK-HRYPIVVNMLTWNDGINLRALNNEGFTALDIAET 400
>At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) /
potassium channel protein identical to SKOR [Arabidopsis
thaliana] gi|3810676|emb|CAA11280; member of the 1 pore,
6 transmembrane (1P/6TM) Shaker K+ channel family,
PMID:11500563
Length = 828
Score = 30.3 bits (65), Expect = 0.90
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 253 AMLRLGAAPDARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETP 414
+++R G P+ D DG +PLHL D+ L+ ++ + G TP
Sbjct: 566 SLIRAGGDPNKTDYDGRSPLHLAASRG--YEDITLYLIQESVDVNIKDKLGSTP 617
>At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / ACBP,
putative similar to acyl-CoA binding protein 2
[Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 338
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 268 GAAPDARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGET 411
G +ARD++G TPLH ++ +V L++ A ++ + EG+T
Sbjct: 241 GIPVNARDSEGRTPLHWA--IDRGHLNVAEALVDKNADVNAKDNEGQT 286
>At4g03450.1 68417.m00472 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 641
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 286 RDADGNTPLHL-VCKLNPCPADVVRELLNHGAHIDTVNYEGETPEEILKSTQQT 444
+D DGNTPLHL P +++ + G H+ N +G + +I +S Q+
Sbjct: 360 QDVDGNTPLHLATLTWRPRTVNILNK-FTLGNHLHIRNKDGLSALDIAESNLQS 412
>At5g03670.1 68418.m00326 expressed protein
Length = 516
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 48 STRGGTWSAL*RYGNGPWTIDFQRTVSIPNRS 143
S+ G WS G W +DF+ ++S +RS
Sbjct: 203 SSSSGVWSESVTNGERSWDVDFETSISTSSRS 234
>At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar to
RNA helicase (RH25) [Arabidopsis thaliana] GI:3776023;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain
Length = 798
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 334 PCPADVVRELLNHGAHIDTVNYEGETPEEILKSTQQTLTSIVNPLRYTTLKCLAA 498
P + VRE L+ +D V E + P + + S ++ S ++PL TLK L+A
Sbjct: 294 PLDINTVREDLSKRKSVDNVMEEKQEPHDSIYSAKRFDESCISPL---TLKALSA 345
>At2g31800.1 68415.m03882 ankyrin protein kinase, putative similar
to ankyrin-kinase [Medicago truncatula]
gi|18700701|gb|AAL78674; contains Pfam profile PF00023:
Ankyrin repeat; identical to cDNA calcineurin B-like
protein 10 (CBL10) GI:29150247; blastp match of 67%
identity and 1.9e-200 P-value to
GP|18700701|gb|AAL78674.1|AF458699_1|AF458699
ankyrin-kinase {Medicago truncatula}
Length = 476
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 358 ELLNHGAHIDTVNY 399
++LNHGAHID NY
Sbjct: 349 KILNHGAHIDPSNY 362
>At1g14000.1 68414.m01652 protein kinase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00069
protein kinase domain, PF00023 ankyrin repeat
Length = 438
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 283 ARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETP 414
ARD D TPLH V L+ DVV+ LL GA ++ + TP
Sbjct: 66 ARDYDKRTPLH-VASLHGW-IDVVKCLLEFGADVNAQDRWKNTP 107
>At2g24600.3 68415.m02939 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 601
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 283 ARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTV-NYEGETP 414
+R+A G+TPLHL L ++V ++L+ G + + N + +TP
Sbjct: 66 SRNAYGDTPLHLAALLG--DVNIVMQMLDTGLELYSARNNKNQTP 108
>At2g24600.2 68415.m02938 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 548
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 283 ARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTV-NYEGETP 414
+R+A G+TPLHL L ++V ++L+ G + + N + +TP
Sbjct: 66 SRNAYGDTPLHLAALLG--DVNIVMQMLDTGLELYSARNNKNQTP 108
>At2g24600.1 68415.m02937 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 548
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 283 ARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTV-NYEGETP 414
+R+A G+TPLHL L ++V ++L+ G + + N + +TP
Sbjct: 66 SRNAYGDTPLHLAALLG--DVNIVMQMLDTGLELYSARNNKNQTP 108
>At1g05640.1 68414.m00585 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 627
Score = 27.5 bits (58), Expect = 6.4
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 289 DADGNTPLHLVCKLNPCPADVVRELLN-HGAHIDTVNYEGETPEEIL-KSTQQTLTSIVN 462
D+ GNTPLH N +VR L++ G +++ +N G+T +I K L S++
Sbjct: 321 DSKGNTPLHTA--TNKGRIKIVRCLVSFDGINLNAMNKAGDTALDIAEKIGNPELVSVLK 378
Query: 463 PLRYTTLKCL 492
T K L
Sbjct: 379 EAGAATAKDL 388
>At5g54710.1 68418.m06813 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 598
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 289 DADGNTPLHLVCKLNPCPADVVRELLNHG-AHIDTVNYEGET 411
+ DGNTPLHL ++ +++ ++L G A +N +G+T
Sbjct: 99 NVDGNTPLHLAAEIG--NINILWKMLETGEAECMKINKQGQT 138
>At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein /
ankyrin repeat family protein similar to patsas protein
[Drosophila melanogaster] GI:6002770; contains Pfam
profiles PF00023: Ankyrin repeat, PF01529: DHHC zinc
finger domain
Length = 592
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1
Query: 271 AAPDARDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETP 414
A PD D DG +PLH AD +R LL A+ + EG TP
Sbjct: 156 ADPDVPDNDGRSPLHWAAYKG--FADSIRLLLFLDAYRGRQDKEGCTP 201
>At4g03500.1 68417.m00477 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 652
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 286 RDADGNTPLHLVCKLNPCPADVVRELLNHGAHIDTVNYEGETPEEI 423
+D +GNTPLHL +N P V +H + NY G T ++
Sbjct: 383 QDVNGNTPLHL-ATINWHPKVVSMFTWDHRVDLKKRNYIGFTALDV 427
>At2g07750.1 68415.m01003 DEAD box RNA helicase, putative similar to
RNA helicase RH25 [Arabidopsis thaliana] GI:3776023;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain
Length = 845
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 340 PADV--VRELLNHGAHIDTVNYEGETPEEILKSTQQTLTSIVNPLRYTTLKCLAA 498
P D+ VRE L+ +D V E + P + + S ++ S ++PL TLK L+A
Sbjct: 341 PLDINRVREDLSKKQSVDNVMEEKQEPHDSIYSAKRFDESCISPL---TLKALSA 392
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,340,012
Number of Sequences: 28952
Number of extensions: 178878
Number of successful extensions: 622
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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