Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021266
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03) 32 0.40
SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07) 32 0.40
SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32) 31 0.70
SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 30 1.6
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 29 2.1
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 29 2.8
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_41787| Best HMM Match : Frizzled (HMM E-Value=0) 29 3.7
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 3.7
SB_35753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_27213| Best HMM Match : DUF1416 (HMM E-Value=0.18) 29 3.7
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 29 3.7
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 28 6.5
SB_12566| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 27 8.6
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 27 8.6
SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06) 27 8.6
SB_1646| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 51 KTSSG-SKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNP- 224
KTS+ S PS+ + S +P+P + S PN ++ P+ +S P + P+P
Sbjct: 455 KTSNPISNPSISTSPISNPSPRPHPSPHPSSNPSPNPSPNPSSDPSPNPSSNPSSDPSPN 514
Query: 225 LSSDPTAHGPSSLIKN 272
SS+P++ + I N
Sbjct: 515 PSSNPSSEPSPNPISN 530
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNV-ATLSGPSEASKPDAPPNPLSS 233
S+ S PS+P T S+ TP T I G P+ T PS S P P P S+
Sbjct: 689 STPSTPSMPNTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTP-ST 747
Query: 234 DPTAHGPSS 260
T PS+
Sbjct: 748 RSTPSTPST 756
Score = 31.5 bits (68), Expect = 0.53
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNV-ATLSGPSEASKPDAPPNPLSS 233
S+ S PS+P T S+ TP T P++ +T S PS S P P P S+
Sbjct: 250 STPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTP-SA 308
Query: 234 DPTAHGPSS 260
T PS+
Sbjct: 309 PSTPSTPST 317
Score = 31.5 bits (68), Expect = 0.53
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNV-ATLSGPSEASKPDAPPNPLSS 233
S+ S PS+P T S+ TP T P++ +T S PS S P P P S+
Sbjct: 800 STPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTP-SA 858
Query: 234 DPTAHGPSS 260
T PS+
Sbjct: 859 PSTPSTPST 867
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNV-ATLSGPSEASKPDAPPNPLS- 230
S+ S PS P T S TP T PN +T S PS S P P P +
Sbjct: 662 STPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTPSTPSTPSTPSTPITPGTPSTP 721
Query: 231 SDPTAHG 251
S P+A G
Sbjct: 722 STPSAPG 728
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNV-ATLSGPSEASKPDAPPNPLSS 233
S+ S PS+P T S+ TP T P+ +T S P S P P P ++
Sbjct: 830 STPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTPSTN 889
Query: 234 -DPTAHGPSSLIKNFL 278
T+ G I NFL
Sbjct: 890 RKSTSLGMQENIANFL 905
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNV----ATLSGPSEASKPDAPPNP 224
S+ S PS P T S+ TP T PN +T S PS S P P P
Sbjct: 187 STPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTP 246
Query: 225 LSSDPTAHGPS 257
S+ T PS
Sbjct: 247 -STPSTPSTPS 256
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNV----ATLSGPSEASKPDAPPNP 224
S+ S PS P T S+ TP T PN +T S PS S P P P
Sbjct: 737 STPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTP 796
Query: 225 LSSDPTAHGPS 257
S+ T PS
Sbjct: 797 -STPSTPSTPS 806
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNV----ATLSGPSEASKPDAPPNP 224
S+ S PS+ +T S+ TP T P+ +T S PS +S P P P
Sbjct: 444 STPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTP 503
Query: 225 LSSDPTAHG 251
S P+A G
Sbjct: 504 --STPSAPG 510
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = +3
Query: 45 RLKTSSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNP 224
RLK S+ S P P T S+ TP ++ T +T T S PS S P P P
Sbjct: 6 RLKLSTPSTPCTPSTPSTPSTPSTP----RTPSTPST----PCTPSTPSTPSTPITPSTP 57
Query: 225 LSSDPTAHGPSS 260
S P H S
Sbjct: 58 --STPCTHSTPS 67
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAP--PNPLS 230
S+ S S P T S+ TP T T P +T S PS S P P PN S
Sbjct: 644 STPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTP--STPSTPSTPSTPSTPSMPNTPS 701
Query: 231 SDPTAHGPSSLI 266
+ T PS+ I
Sbjct: 702 TPSTPSTPSTPI 713
>SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03)
Length = 307
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 79 YLTPAHPE-KPPSPSKQG*NPVRLLPP 156
+L+PAH E KPP PS +G +PV+LL P
Sbjct: 9 FLSPAHFEVKPPKPSVKG-HPVKLLTP 34
>SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07)
Length = 2008
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Frame = +3
Query: 63 GSKPSVPYTGSSGE--TPKPQ*TRIKSGETLATGFPNVATLSGPS-------EASKPDAP 215
G+ P+ +T S TP P T + G+T+ PNV G + AS AP
Sbjct: 675 GTNPTCTWTSKSTVMITPGPSAT-LSPGDTMTLN-PNVIKADGQAYAKFASGSASIIQAP 732
Query: 216 PNPLSSDPTAHGPSSL 263
NP S+ P GP+SL
Sbjct: 733 ANPQSAQPVITGPTSL 748
>SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32)
Length = 584
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 18 NCYRTTLV*RLKTSSGSKPSVPYTGSSGETPKPQ*TRIKSG-ETLATGFPNVATLSGPSE 194
NC + L R ++ SK ++GETP P T + SG T + P A + P +
Sbjct: 293 NCTQDEL--RYVSNDISKLYKHVCSANGETPSPMLTSVGSGSRTGSPAAPTNAASASPGK 350
Query: 195 ASKPDAPPNPLSSD 236
+ P+ +P+ S+
Sbjct: 351 SGGPEERQSPMGSE 364
>SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 34 PSSNVSKHHQVQNQAYLTPAHPEKPPSPSKQG*NPVRLLPP 156
P SN HH + ++ + P PP P Q +P+R PP
Sbjct: 1029 PRSNGMLHHNIAHEPIMEEPFP--PPPPPYQTGSPIRAFPP 1067
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/97 (26%), Positives = 39/97 (40%)
Frame = +3
Query: 54 TSSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLSS 233
+SSG PSV Y + + K + ++K ET G + +S P SS
Sbjct: 1822 SSSGETPSVVYCKEANDEEKEKAGKLKLPETFFAGEAKERIDAVQLSSSTETKSPTEKSS 1881
Query: 234 DPTAHGPSSLIKNFLAFHLPITSAPF*IASDSMCQRF 344
P G S+ A ++PF I+SD + F
Sbjct: 1882 KPFLFGSPSVSSLSFASVAGAGTSPF-ISSDGSAKPF 1917
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLSSD 236
S+GS+ S+ T ET T I S ETL+TG P+ TL P+E S + L +
Sbjct: 264 STGSQTSLNQTTPPNETS----TEILSNETLSTGLPSNQTL--PTELSSNETFSTELPLN 317
Query: 237 PTAHGPSSLIKN 272
T P+ L N
Sbjct: 318 QTL--PNELPSN 327
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 132 KSGETLATGFPNVATLSGPSEASKPDAPPNPLSSDPTAH-GPSSLIKNFLAFH 287
K ETL + + ++ PS D+ PN SS P+ + SS I+ +L++H
Sbjct: 266 KKKETLKRKKSSGSKITSPSLLQSSDSSPNSTSSTPSINQQTSSGIRTYLSYH 318
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 9 P*PNCYRTTLV*RLKTSSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLS-G 185
P P+ TT + +++ KPS T ++ P P T IK + P+ +T
Sbjct: 1266 PSPSTTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTPIK 1325
Query: 186 PSEASKPDAP-PNPLSSDPTAHGPSS 260
PS ++ P P P+ S+ P PS+
Sbjct: 1326 PSPSTTPIKPSPSTTSTTPIKPSPST 1351
>SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1227
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 195 ASKPDAPPNPLSSDPTAHGPSSLIKNFLAFHLPI 296
A++P P+P ++DP HG + + L HL +
Sbjct: 1077 AAQPRLRPSPYAADPARHGEGAALTEPLEVHLAV 1110
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +3
Query: 105 TPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLSSDPTAHG 251
T P T E TG P GPS +S P P S+ PTA G
Sbjct: 300 TTSPATTPTSGTEGAGTGGPGTG---GPSGSSNPPTTGTPASASPTAPG 345
>SB_41787| Best HMM Match : Frizzled (HMM E-Value=0)
Length = 542
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 75 LVLNLMMF*DVRRGLFDNNWVRGWK 1
+V+ + + R L+DN+W+ GWK
Sbjct: 439 VVIGCLYYEQSNRELWDNSWIEGWK 463
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/82 (31%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = +3
Query: 72 PSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLSSDPTAHG 251
P+ P P P + T PN + P S P APPNP S P A
Sbjct: 298 PAPPNLFIPSAPPNPHIPPAPPNPYIPTAPPNPSIPPAPPNPSIPPAPPNP--SIPPA-P 354
Query: 252 PSSLIKNFL--AFHLPITSAPF 311
P+ I AFH T+ PF
Sbjct: 355 PNLFIPPATPNAFHTISTTKPF 376
>SB_35753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 195 ASKPDAPPNPLSSDPTAHGPSSLIKNFLAFHLPI 296
A++P P+P ++DP HG + L HL +
Sbjct: 39 AAQPRLRPSPYAADPARHGEGDALTEPLEVHLAV 72
>SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1963
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 123 TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLSSDPTAHGPSSLIKNF 275
T K G L PN ++ P + PD P PL+++ G +S+I F
Sbjct: 51 TGFKKGIELLKLNPNSDAITVPHTLTPPDKTPLPLNTNVNNVGMASMINRF 101
>SB_27213| Best HMM Match : DUF1416 (HMM E-Value=0.18)
Length = 752
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = +3
Query: 45 RLKTSSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSG-----PSEASKPD 209
R K+ GS SG+ PKP+ G ++TG PN+ G P+ S P
Sbjct: 183 RAKSRDGSSSGRSQQQESGKPPKPKRADSVRGADVSTGAPNIRLQLGMFTLYPAVGSVPA 242
Query: 210 APPNPLSSDPTAHGP 254
++ D A P
Sbjct: 243 GGTAQITVDMMAETP 257
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 4 PSPDPIVIEQPSS-NVSKHHQVQNQAYLTPAHPEKPPSPSKQ 126
P P P QPS+ N ++++ NQ PA P PP +Q
Sbjct: 507 PPPPPPPRNQPSNQNWNQNYDQSNQNMYGPAPPPPPPQQQQQ 548
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 27.9 bits (59), Expect = 6.5
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +3
Query: 54 TSSGSKPSVPYTGS--SGETPKPQ*TRIKSGETLATGFPNVATLSGPSE-ASKP---DAP 215
T + + + P+T + S T KPQ T I T TG T + PSE A KP + P
Sbjct: 728 TGNPALKTTPHTTTRPSEATAKPQATAIPPATTKPTGSTQSPTDNSPSEKAMKPGKANKP 787
Query: 216 PNPLSSDPT 242
P P + PT
Sbjct: 788 PVPTQA-PT 795
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 144 TLATGFPNVATLSGPSEASKPDAPPNPLSSDPTAHGPSSLIKNF-LAFHLPITSA 305
+++ FP+ T S P +S P P+PL+S S L + L P+TS+
Sbjct: 164 SISAYFPSPLTSSSPLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSS 218
>SB_12566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 195 ASKPDAPPNPLSSDPTAHGPSSLIKNFLAFHL 290
A++P P+P ++DP HG + L HL
Sbjct: 42 AAQPRLRPSPYAADPARHGEGDALTEPLEVHL 73
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 54 TSSGSKPSVPYTGSSGETPKPQ*TRIKSGETL--ATGFPNVATLSGPSEASKPDAPPNPL 227
T+ G PS + P+ + S T + P AT + ++KP+A P
Sbjct: 1604 TTKGKSPSKTSATKATHAKNPKSAKPGSSSTKPGTSAKPGAATAKPGAASAKPEAVPAKT 1663
Query: 228 SSDPTAHGPSS 260
+ T GPS+
Sbjct: 1664 GAASTKSGPSA 1674
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 54 TSSGSKPSVPYTGSSGETPKPQ*TRIKSGETL--ATGFPNVATLSGPSEASKPDAPPNPL 227
T+ G PS + P+ + S T + P AT + ++KP+A P
Sbjct: 499 TTKGKSPSKTSATKATHAKNPKSAKPGSSSTKPGTSAKPGAATAKPGAASAKPEAVPAKT 558
Query: 228 SSDPTAHGPSS 260
+ T GPS+
Sbjct: 559 GAASTKSGPSA 569
>SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06)
Length = 1977
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 84 YTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDA--PPNPLSSDPTAHGPS 257
Y+GS K T ++ G+ ++TG + + G ++A K + +P + P A GP+
Sbjct: 930 YSGSFFPNRKDNATSLQEGQLVSTGNTHTKSKVGSAKAEKAPSSDSKSPYIAKPPAKGPN 989
>SB_1646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSG--ETLATGFPNVATLSGPSEASKPDAPPNPLS 230
SSGS P P + SS P+ + +S + LA G+P ++SG + P +PLS
Sbjct: 221 SSGS-PHSPISPSSHTLPRSHRSFHESSGIQALAGGYPIRHSVSGSHTLPRSYKPLSPLS 279
Query: 231 SDPTAHGPSSLIKNFLAFH 287
S A +K H
Sbjct: 280 SPTHAQSLPECLKKTGGHH 298
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,696,559
Number of Sequences: 59808
Number of extensions: 394580
Number of successful extensions: 1525
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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