Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021266
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           27   0.46 
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       25   1.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   1.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   3.2  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   4.3  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   4.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.3  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    23   5.6  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   5.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.4  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   9.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   9.8  

>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 21/91 (23%), Positives = 34/91 (37%)
 Frame = +3

Query: 9   P*PNCYRTTLV*RLKTSSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGP 188
           P P    T  +    T++   P+   T S    P P  T         T      T + P
Sbjct: 213 PPPTTTTTVWIDPTATTTTHAPTTTTTWSDQPPPPPTTTTTTVWTDPTTTITTDYTTAYP 272

Query: 189 SEASKPDAPPNPLSSDPTAHGPSSLIKNFLA 281
              ++P + P+P  +DP    P + + N+ A
Sbjct: 273 PTTNEPPSTPHP--TDPHCPPPGATLPNYWA 301


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +2

Query: 8   PLTQLLSNNPRLTSQNIIRFKTKRTLHRL 94
           PL+++  +NPRL S+ I  +  ++T  R+
Sbjct: 236 PLSEMDFSNPRLASETINNWAREKTRQRI 264


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 380  AQASNSTPQRVWAHLCTLFPDSLL 451
            A  SNSTP R  A + T F DS L
Sbjct: 1315 AAPSNSTPSRSVARIVTSFTDSPL 1338


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 5   HPLTQLLSNNPRLTSQNIIRFKTKRTLHRLIRRNPQAPVNK 127
           H L +  +N+P L ++ +   +  R+  R  RR+P  P+N+
Sbjct: 199 HQLIRFETNSPALAARRVKLSQRNRSQQRSPRRDP--PINR 237


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 75  SVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPP 218
           S P + S+GE P        + +  +  F  V  L+G S A+ P +PP
Sbjct: 261 SPPASVSNGEQPASSVGDPANPQQPSVIFSPVPRLAGSSPAAAPPSPP 308


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +3

Query: 162 PNVATLSGPSEASKPDAPPNPLSSDPTAHGPSSLIKNFLAFHLPITSAPF 311
           P++  ++G   A  P A P      PT    ++L   F +   P   +PF
Sbjct: 77  PSLKPVAGAPAAPGPSALPLSSRKSPTVSSAAALNSGFPSIANPNPRSPF 126


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +3

Query: 162 PNVATLSGPSEASKPDAPPNPLSSDPTAHGPSSLIKNFLAFHLPITSAPF 311
           P++  ++G   A  P A P      PT    ++L   F +   P   +PF
Sbjct: 77  PSLKPVAGAPAAPGPSALPLSSRKSPTVSSAAALNSGFPSIANPNPRSPF 126


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -1

Query: 229 LKGLGGASGFEASEG-PLRVATFGKP 155
           LKG  G  GF  SEG P    T G+P
Sbjct: 113 LKGAKGVRGFPGSEGLPGEKGTKGEP 138


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +3

Query: 204 PDAPPNPLSSDPTAHGPSSLIKNFLAFHLPITSAP 308
           PD  P P + DP    P  + +     +LP    P
Sbjct: 418 PDIYPEPATYDPDRFTPERMARRDPCAYLPFGEGP 452


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 223  GLGGASGFEASEGPLRVATFGKPV 152
            G GGA  F   EG  R   F KP+
Sbjct: 1198 GSGGAGQFRGGEGVHRELLFRKPM 1221


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 34  PSSNVSKHHQVQNQAYLTPAH 96
           PS    + HQ Q Q+ L P H
Sbjct: 248 PSQQKHQQHQQQQQSVLLPKH 268


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate
          2-sulfatase precursor protein.
          Length = 525

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -2

Query: 96 MSRCKVRLVLNLM 58
          M RCKVRL+L+L+
Sbjct: 1  MWRCKVRLLLSLL 13


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 468 RSKGPSRRESGKR 430
           R +GPS RESG R
Sbjct: 223 RQEGPSTRESGTR 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,800
Number of Sequences: 2352
Number of extensions: 12042
Number of successful extensions: 55
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)