Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021266
(595 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 25 0.56
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 3.9
X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein. 22 5.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 5.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 6.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 6.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 6.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 6.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 6.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 6.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 6.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 6.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 6.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 6.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 6.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 6.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 6.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 6.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 6.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 6.9
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.1
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 25.0 bits (52), Expect = 0.56
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 492 CSELKP*ERSKGPSRRESGKRVQR 421
C P R PSR+ESG+R +R
Sbjct: 389 CVACSPPPRQTPPSRKESGRRRRR 412
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +1
Query: 25 IEQPSSNVSKHHQVQNQAYLTPAHPEKPPSPSKQG 129
I +PS N + H + +P + PPS + G
Sbjct: 373 IPEPSKNPAMGHWQMSCVACSPPPRQTPPSRKESG 407
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 3.9
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -3
Query: 389 RLEQKQQEDRAEQGKEALT 333
++ +K++ED ++GKE+ T
Sbjct: 209 KVPEKKKEDEIDEGKESKT 227
>X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein.
Length = 103
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 503 ELRGVLS*SLESVLRD 456
E RGVL LE+V+RD
Sbjct: 54 ETRGVLKVFLENVIRD 69
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PSPDPIVIEQPSSNVS 51
PSP+P + PSS+ S
Sbjct: 511 PSPNPRIASAPSSSTS 526
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 377 PPRFIPPDMYRLRPPPNPR 395
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 362 PPRFIPPDMYRLRPPPNPR 380
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 136 PVRLLPPAFQMLRP*AAPR 192
P R +PP LRP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 165 NVATLSGPSEASKPDAPPNP 224
N LSG S+ S PP P
Sbjct: 369 NAMLLSGRSQKSTTGPPPGP 388
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 359 PCLLVAFAQASNSTPQRVWA 418
P + + + A N TPQ WA
Sbjct: 437 PAVSLKCSAAGNPTPQVTWA 456
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 359 PCLLVAFAQASNSTPQRVWA 418
P + + + A N TPQ WA
Sbjct: 437 PAVSLKCSAAGNPTPQVTWA 456
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,833
Number of Sequences: 438
Number of extensions: 3432
Number of successful extensions: 26
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -