Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021266
(595 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59270.1 68418.m07427 lectin protein kinase family protein co... 32 0.33
At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family... 32 0.33
At4g28800.1 68417.m04118 bHLH family protein contains Pfam profi... 31 0.58
At3g28790.1 68416.m03593 expressed protein 31 0.77
At3g22150.1 68416.m02796 pentatricopeptide (PPR) repeat-containi... 31 0.77
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 31 0.77
At5g25270.1 68418.m02996 expressed protein 30 1.0
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 1.3
At1g79350.1 68414.m09247 DNA-binding protein, putative contains ... 30 1.3
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 29 3.1
At4g34440.1 68417.m04894 protein kinase family protein contains ... 29 3.1
At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family... 29 3.1
At3g32940.1 68416.m04174 expressed protein 29 3.1
At3g13760.1 68416.m01736 DC1 domain-containing protein contains ... 29 3.1
At5g25820.1 68418.m03064 exostosin family protein contains Pfam ... 28 4.1
At4g28550.1 68417.m04084 RabGAP/TBC domain-containing protein si... 28 4.1
At2g20440.1 68415.m02386 RabGAP/TBC domain-containing protein si... 28 4.1
At1g04930.1 68414.m00490 hydroxyproline-rich glycoprotein family... 28 4.1
At3g55950.1 68416.m06217 protein kinase family protein contains ... 28 5.4
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 5.4
At3g09000.1 68416.m01053 proline-rich family protein 28 5.4
At3g08670.1 68416.m01007 expressed protein 28 5.4
At1g60590.1 68414.m06820 polygalacturonase, putative / pectinase... 28 5.4
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 28 5.4
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 27 7.1
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 27 7.1
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 27 7.1
At1g55820.1 68414.m06400 hydroxyproline-rich glycoprotein family... 27 7.1
At1g05920.1 68414.m00621 hypothetical protein contains Pfam prof... 27 7.1
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 27 9.4
At5g03640.1 68418.m00323 protein kinase family protein contains ... 27 9.4
At4g18400.1 68417.m02731 expressed protein 27 9.4
At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99... 27 9.4
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 27 9.4
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 27 9.4
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 27 9.4
>At5g59270.1 68418.m07427 lectin protein kinase family protein
contains Pfam domains PF00139: Legume lectins beta
domain and PF00069: Protein kinase domain
Length = 668
Score = 31.9 bits (69), Expect = 0.33
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +3
Query: 69 KPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATL---------SGPSEASKPDAPPN 221
KP++PY SS + KP +R + + G V +L + P S P PP
Sbjct: 218 KPALPYLSSSIKPRKPLLSRFINISEIFNGTMFVESLDLSKILDPPNRPPPPSSPPPPPP 277
Query: 222 PLSSDPTAHGPSSLIKNFLAFHLPITSAPF 311
P + PT+ S KN + + +TS F
Sbjct: 278 PPPTPPTSRSKDS--KNIIIICVTVTSIAF 305
>At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 383
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 46 VSKHHQV-QNQAYLTPAHPEKPPSPSKQG*NPVRLLPP 156
V K HQ+ Q Q L P P PP PS+ P+ L PP
Sbjct: 204 VPKVHQIIQQQPVLLPLQPPPPPPPSQPLPRPLLLPPP 241
>At4g28800.1 68417.m04118 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain
Length = 478
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 72 PSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLSSDP 239
P +P+ G+S P S FPN+ T PS P PNP+S+ P
Sbjct: 380 PFIPFPGTSFPMPAQMAGVGPSYPAPRYPFPNIQTFD-PSRVRLPSPQPNPVSNQP 434
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 30.7 bits (66), Expect = 0.77
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 51 KTSSGSKPSVPYTGSSGETPKPQ*TRIKSGETLA---TGFPNVATLSGPSEASKPDAPPN 221
K+SS +K GSSG T K T SG + + T P+ T S P+ ++ + P
Sbjct: 244 KSSSSAKTKEVSGGSSGNTYKDT-TGSSSGASPSGSPTPTPSTPTPSTPTPSTPTPSTPT 302
Query: 222 PLSSDPTAHGPSS 260
P + P+ PS+
Sbjct: 303 PSTPTPSTPAPST 315
>At3g22150.1 68416.m02796 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 820
Score = 30.7 bits (66), Expect = 0.77
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 1 LPSPDPIVIEQPSSNVSKHHQVQNQAYLTPAHP 99
LP P P+ ++ PS N ++H + LTP P
Sbjct: 8 LPPPPPLSLQSPSQNQTRHSSTFSPPTLTPQTP 40
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKS-GETLATGFPNVATLSGPSEASKPDAPPNPLSS 233
S S P + + SS P P + + S +L+ P+ + S P + P +PP PLS
Sbjct: 54 SPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAPPSSLSPSSPP-PLSL 112
Query: 234 DPTAHGP 254
P++ P
Sbjct: 113 SPSSPPP 119
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 180 SGPSEASKPDAPPNPLSSDPTAHGPSSL 263
S P + P P+P SS P++ PSSL
Sbjct: 75 SSPLSSLSPSLSPSPPSSSPSSAPPSSL 102
>At5g25270.1 68418.m02996 expressed protein
Length = 540
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +3
Query: 60 SGSKPSVPYTGSS-GETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLSSD 236
+G+ S P+ G S P+ RI++G + N S + P P S+
Sbjct: 277 AGTAHSNPFAGQSLASAPRNIEIRIRTGSWVPASGTNQREESTTQQTPGQTIPSTPSSTT 336
Query: 237 ---PTAHGPSSLIKNFLAFHLPITS 302
P+ GPS ++N +A +P+ +
Sbjct: 337 DPAPSTRGPSEPLRNPVALVIPVVA 361
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Frame = +3
Query: 54 TSSGS--KPSVPYTGS---SGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPP 218
TS GS PS P S S TP T I G+ P+ +GPS S P P
Sbjct: 541 TSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPS-PPFTGPSPPSSPSPPL 599
Query: 219 NPLSSDPTAHGPS 257
P+ P GP+
Sbjct: 600 PPVIPSPPIVGPT 612
>At1g79350.1 68414.m09247 DNA-binding protein, putative contains
Pfam PF00628: PHD-finger domain; contains TIGRFAMS
TIGR01053: zinc finger domain, LSD1 subclass; contains
Pfam PF00271: Helicase conserved C-terminal domain;
similar to WSSV086 (GI:19481678)[shrimp white spot
syndrome virus]; similar to nuclear protein Np95
(GI:17939938) [Mus musculus]
Length = 1299
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 82 LTPAHPEKPPSPSKQG*NPVRLLPPAF-QMLRP*AAPRKP 198
L+ A P+ P SP +Q P++ LPP Q L+P PR P
Sbjct: 64 LSRARPQFPQSP-QQPPQPIQTLPPPIQQQLKPLNLPRPP 102
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 57 SSGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGP--SEASKPDAPPN-PL 227
S + P + GS +TP T S T + P+V+ + P S ++ P A P+
Sbjct: 660 SPSTSPPAGHLGSPSDTPSSVVTPSASPSTSPSASPSVSPSAFPSASPSASPSASPSVSP 719
Query: 228 SSDPTAHGPSSL 263
S+ P+A SS+
Sbjct: 720 SASPSASPQSSI 731
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 4 PSPDPIVIEQPSSNVSKHHQVQNQAYLTPAHPEKPP-SPSKQG*NPVRLLPPA 159
PS P V+ PS ++ TP P PP +PS Q +P R PP+
Sbjct: 72 PSSSPPVVANPSPQTPENPSPPAPEGSTPVTPPAPPQTPSNQ--SPERPTPPS 122
>At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to vegetative cell wall
protein gp1 [Chlamydomonas reinhardtii]
gi|12018147|gb|AAG45420
Length = 175
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Frame = +1
Query: 4 PSPD----PIVIEQPSSNVSKHHQVQNQA--YLTPAHPEKPPSPSKQG*NPVRLLPP 156
PSPD P++ P S + H+ Y +P PE SPS N + PP
Sbjct: 29 PSPDLADSPLIHASPPSKLGSHNSPAESPIEYSSPPEPETEHSPSPSPANSPSVSPP 85
>At3g32940.1 68416.m04174 expressed protein
Length = 607
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 182 RPLGSLKTRRPS*SFKFRSNSSWALLP--HKELFGISSPDHECTFLNRKRLNVSTLPFPA 355
+P+G T RPS F F LLP + + ++ ++ + ++PFP+
Sbjct: 367 QPIGPRSTVRPSTLFTFHPVHRPTLLPDIDQSVRPLAPNFSPHPVAHQPGTEIPSIPFPS 426
Query: 356 QPCLLVAFAQASNSTPQRVWAHLCT 430
L+ + S+ P V H+ +
Sbjct: 427 ASSLIAEYGSGSSLRPMSVSPHIAS 451
>At3g13760.1 68416.m01736 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 11 LTQLLSNNPRLTSQNIIRFKTKRTLHRLIRRNPQAPVNKDKIR*DSCHRLSKCCDPKRPL 190
+ L+ P + ++II +T T P+ ++ DS H LS CDPK PL
Sbjct: 9 IPHLMMEEPTVKEEDIIHNQTS-TKEMYDAEKPRCLLSHPA---DSPHNLSVGCDPKLPL 64
Query: 191 G 193
G
Sbjct: 65 G 65
>At5g25820.1 68418.m03064 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 654
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -1
Query: 226 KGLGGASGFEASEGPLRVATFGKPVARVSPDFILVYWGLGVSPDEPV*GTL 74
K L G A++ P+ GKP +L YWG PD + G L
Sbjct: 475 KPLSNMGGKSANQRPILAFFAGKPDHGYLRPILLSYWGNNKDPDLKIFGKL 525
>At4g28550.1 68417.m04084 RabGAP/TBC domain-containing protein
similar to SP|P09379 GTPase-activating protein GYP7
(Fragment) {Yarrowia lipolytica}; contains Pfam profile
PF00566: TBC domain
Length = 424
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 167 IWKAGGKSLTGFYP 126
+WK+GG+ L GFYP
Sbjct: 7 MWKSGGEDLQGFYP 20
>At2g20440.1 68415.m02386 RabGAP/TBC domain-containing protein
similar to SP|P09379 GTPase-activating protein GYP7
(Fragment) {Yarrowia lipolytica}; contains Pfam profile
PF00566: TBC domain
Length = 425
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 167 IWKAGGKSLTGFYP 126
+WK+GG+ L GFYP
Sbjct: 7 MWKSGGEDLQGFYP 20
>At1g04930.1 68414.m00490 hydroxyproline-rich glycoprotein family
protein Common family member: At2g32840 [Arabidopsis
thaliana]
Length = 332
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 10 PDPIVIEQPSSNVSKHHQVQNQAYLTPAHPEKPPSPSKQG*NPVRLLPPAFQMLRP*AAP 189
PDP S VS ++ +TP + +PP PS+ P L PP ++ + P P
Sbjct: 4 PDPN--SSASLTVSPSLSTASETPVTPVNTVRPP-PSQPPPAPPPLPPPTYRPIAPLRHP 60
Query: 190 RKPQNQT 210
Q Q+
Sbjct: 61 NPFQQQS 67
>At3g55950.1 68416.m06217 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; similar to
cytokinin-regulated kinase 1 [Nicotiana tabacum]
gi|10998537|gb|AAG25966
Length = 814
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 114 PQ*TRIKSGE-TLATGFPNVATLSGPSEASKPDAPPNPLSSDPTAHGPS-SLIKNFLAF 284
PQ ++ SG ++ P S PS+ P PP P S T+ PS +L + LAF
Sbjct: 340 PQSDKLCSGTGSICKSCPIQFPASPPSQFPLPPPPPPPPPSPSTSSPPSKALTRGLLAF 398
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 93 SSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLSSDPTAHGPSS 260
S G TP P + T T P S P + P +PP S++ T+ PSS
Sbjct: 6 SPGTTPSPSPPSPPTNSTTTTPPP---AASSPPPTTTPSSPPPSPSTNSTSPPPSS 58
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 54 TSSGSKP-SVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLS 230
T+S S+P + + S TP + T + T +T P T S S S NP
Sbjct: 170 TTSTSRPVTTRASNSRSSTPTSRATLTAARATTSTAAPRTTTTSSGSARSATPTRSNPRP 229
Query: 231 SDPTAHGPSS 260
S ++ P S
Sbjct: 230 SSASSKKPVS 239
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 51 KTSSGSKPSVPYT---GSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPN 221
+TSS S+ S P GSS + + S + T P ++ S AS+P++ P
Sbjct: 211 RTSSASRSSTPSRIRPGSSSSSMDKARPSLSSRPSTPTSRPQLSASSPNIIASRPNSRP- 269
Query: 222 PLSSDPTAHGPSS 260
S PT PSS
Sbjct: 270 ---STPTRRSPSS 279
>At1g60590.1 68414.m06820 polygalacturonase, putative / pectinase,
putative similar to polygalacturonase PG1 (GI:5669846),
PG2 (GI:5669848) from [Glycine max]; contains PF00295:
Glycosyl hydrolases family 28 (polygalacturonases)
Length = 540
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 13 DPIVIEQPSSNVSKHHQVQNQAYLTPAHPEKPPSPSKQG*NPVRLLPPAFQMLRP 177
D + ++P S+ + HH + +++ P +PP S G +PV PP Q P
Sbjct: 50 DSLSSKKPKSHENNHHHMSHKSKPKPKMKTQPPK-SNDG-SPVVSQPPQVQQPPP 102
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +1
Query: 88 PAHPEKPPSPSKQG*NPVRLLPPAFQMLRP*AAPRKPQ 201
P+ P PP PS P LPP Q+ P AP KPQ
Sbjct: 74 PSPPPCPPPPSPPPSPPPPQLPPPPQL--PPPAPPKPQ 109
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 7 SPDPIVIEQPSSNVSKHHQVQNQAYLTPAHPEKPPSPSKQG*NPVRLLPP 156
SP P P H Q Q Y +PA+P P P G N PP
Sbjct: 58 SPSPPPPPPPQWGPPSPHYPQGQPYSSPAYPPHQP-PFNAGANGNSQFPP 106
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 7 SPDPIVIEQPSSNVSKHHQVQNQAYLTPAHPEKPPSPSKQG*NPVRLLPP 156
SP P P H Q Q Y +PA+P P P G N PP
Sbjct: 58 SPSPPPPPPPQWGPPSPHYPQGQPYSSPAYPPHQP-PFNAGANGNSQFPP 106
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 88 PAHPEKPPSPSKQG*NPVRLLPPAFQMLRP*AAPRKPQNQT 210
PA P PP P K+G P PP P P P+ T
Sbjct: 405 PAAPPPPPPPGKKGAGPPP--PPPMSKKGPPKPPGNPKGPT 443
>At1g55820.1 68414.m06400 hydroxyproline-rich glycoprotein family
protein
Length = 575
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 159 FPNVATLSGPSEASKPDAPPNPLSSDPTAH 248
FP A L+ PS A D NP +++P H
Sbjct: 422 FPQGAALTAPSHAKPVDNTENPPTTNPYLH 451
>At1g05920.1 68414.m00621 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 315
Score = 27.5 bits (58), Expect = 7.1
Identities = 8/36 (22%), Positives = 21/36 (58%)
Frame = +1
Query: 1 LPSPDPIVIEQPSSNVSKHHQVQNQAYLTPAHPEKP 108
+P +++++ SNV + + + ++ P HP++P
Sbjct: 129 VPEEKDVILDRILSNVPRRKKTTSYEFVPPKHPQEP 164
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 105 TPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDAPPNPLSSDPTAHGPS 257
TP P T + T P A P+ +S P + P+P S PTA P+
Sbjct: 33 TPPPVATPPPAATPAPTTTPPPAVSPAPT-SSPPSSAPSPSSDAPTASPPA 82
>At5g03640.1 68418.m00323 protein kinase family protein contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 926
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 37 SSNVSKHHQVQNQAYLTPAHPEKPPSPSKQG*NPVRL 147
+S+ + +Q A +PA+P P SPSK+ P L
Sbjct: 83 TSSSRNNTPLQRNALKSPANPAGPRSPSKRNAEPATL 119
>At4g18400.1 68417.m02731 expressed protein
Length = 107
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 180 SGPSEASKPDAPPNPLSSDPTAHGPSSLI 266
S P +S+P+ PP S+ P PS +I
Sbjct: 16 SPPESSSQPEHPPPETSTPPATFDPSRMI 44
>At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 489
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 10 PDPIVIEQPSSNVSKHHQVQNQAYLTPA-HPEKPPSPSK 123
P P PS S HQ + Y + A P PP PS+
Sbjct: 79 PPPTYAPAPSPASSYGHQYSQEGYASAASQPNYPPPPSQ 117
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +3
Query: 60 SGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDA-PPNPLSSD 236
+G P+ P T + P P + + P V T P + P A PP P+SS
Sbjct: 19 TGQAPTSPPTATPAP-PTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSP 77
Query: 237 PTAHGPSSLIKNFLAFHLPITSAP 308
P A P + + P+ S P
Sbjct: 78 PPASPPPATPPPVASPPPPVASPP 101
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +3
Query: 60 SGSKPSVPYTGSSGETPKPQ*TRIKSGETLATGFPNVATLSGPSEASKPDA-PPNPLSSD 236
+G P+ P T + P P + + P V T P + P A PP P+SS
Sbjct: 19 TGQAPTSPPTATPAP-PTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSP 77
Query: 237 PTAHGPSSLIKNFLAFHLPITSAP 308
P A P + + P+ S P
Sbjct: 78 PPASPPPATPPPVASPPPPVASPP 101
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 85 TPAHPEKPPSPSKQG*NPVRLLPPAFQMLRP*AAPRKPQNQT 210
TP P PP P KQ P PP + P P P +T
Sbjct: 242 TPPPPPPPPIPVKQSATPPPPPPPKLKNNGPSPPPPPPLKKT 283
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,058,043
Number of Sequences: 28952
Number of extensions: 277562
Number of successful extensions: 987
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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