Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021265X
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   2.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   2.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   2.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   2.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   2.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.9  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 386 GERKEYRNGEDDGFPEDDECQVSGWLR 306
           G+     N EDD   E  + Q+  W+R
Sbjct: 189 GQGSSTNNDEDDDDEETGDRQIYPWMR 215


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 386 GERKEYRNGEDDGFPEDDECQVSGWLR 306
           G+     N EDD   E  + Q+  W+R
Sbjct: 189 GQGSSTNNDEDDDDEETGDRQIYPWMR 215


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = -2

Query: 89  EFHASKFIC--KCVEEVEGL-VIEHSLKEW 9
           EFH SK++C  + ++  + L + E  +K W
Sbjct: 103 EFHRSKYLCRPRRIQMAQNLNLTERQIKIW 132


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = -2

Query: 89  EFHASKFIC--KCVEEVEGL-VIEHSLKEW 9
           EFH SK++C  + ++  + L + E  +K W
Sbjct: 123 EFHRSKYLCRPRRIQMAQNLNLTERQIKIW 152


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 386 GERKEYRNGEDDGFPEDDECQVSGWLR 306
           G+     N EDD   E  + Q+  W+R
Sbjct: 189 GQGSSTNNDEDDDDEETGDRQIYPWMR 215


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -1

Query: 318 GMAEDWRSKSSGAKIIM 268
           G  +DW ++ +GA++I+
Sbjct: 262 GSYDDWLAEMAGARLIV 278


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -1

Query: 318 GMAEDWRSKSSGAKIIM 268
           G  +DW ++ +GA++I+
Sbjct: 269 GSYDDWLAEMAGARLIV 285


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 6   APLFEAMLNDQPFNFLNTFANE 71
           AP  E   +   FNFL+  AN+
Sbjct: 494 APTGENSNSSSDFNFLSNLAND 515


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 6   APLFEAMLNDQPFNFLNTFANE 71
           AP  E   +   FNFL+  AN+
Sbjct: 442 APTGENSNSSSDFNFLSNLAND 463


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,379
Number of Sequences: 336
Number of extensions: 2655
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)