Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021264X
(437 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 57 1e-09
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 5e-05
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 40 2e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.011
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.10
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.10
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 29 0.24
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.31
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.41
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 0.72
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 27 1.3
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 27 1.3
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 1.7
SPAC328.10c |rps502|rps5-2|40S ribosomal protein S5|Schizosaccha... 26 2.2
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 26 2.2
SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces p... 26 2.2
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 2.9
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 25 5.1
SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi... 25 5.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 5.1
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 25 6.7
SPBC19G7.17 ||SPBC36B7.01|translocon subunit Sec61 homolog |Schi... 24 8.9
SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|ch... 24 8.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 57.2 bits (132), Expect = 1e-09
Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVR 432
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKR 80
Score = 24.6 bits (51), Expect = 6.7
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 274 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 426
FA + +GG + A S V ++ + L S + ++++ G+VD +
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVY 182
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.5 bits (93), Expect = 5e-05
Identities = 16/28 (57%), Positives = 26/28 (92%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQVQH 372
L+GG++A VS+TAV+P+ER+K++ QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 39.5 bits (88), Expect = 2e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 280 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 435
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHI 69
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.011
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 262 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 360
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 1.3
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +1
Query: 286 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 381
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 0.10
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 265 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 369
PV + +++G IS + V P+E V++ LQ+Q
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 143
Score = 27.5 bits (58), Expect = 0.96
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 271 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQ 369
+F KDFLA G+S V++ V P + VK+ LQ Q
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQ 48
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 30.7 bits (66), Expect = 0.10
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVD 420
++GG+S A++ + P++ VK LLQ + S I ++ KG +D
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLD 251
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 29.5 bits (63), Expect = 0.24
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 286 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAF 426
FL+GG++A + T P E +K Q+Q ++K + + YK + AF
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAF 74
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.31
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 378
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 28.7 bits (61), Expect = 0.41
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 179 PHPRVPQLPPRHIHLVKIT*SNKMSTSPIRSRSLRTS 289
P+ VP+LPP+ H + S + SP+ SRS T+
Sbjct: 225 PNAYVPRLPPKDDHDTYLNSSEDSTLSPLPSRSSDTN 261
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 0.72
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 280 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 369
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 27.1 bits (57), Expect = 1.3
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +1
Query: 61 AIERDRSNFKKAHTYPLCSRDYEIT---PNL 144
+I + +FKK +YP+ + D+EIT PNL
Sbjct: 407 SIYHRKEDFKKQPSYPVLTSDFEITDAGPNL 437
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.1 bits (57), Expect = 1.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 286 FLAGGISAAVSKTAVAPIERVKLLLQ 363
F+AGG++ + A AP++ VK LQ
Sbjct: 52 FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.6 bits (56), Expect = 1.7
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 124 YEITPNLLFKNQELVFRDPPSACAATPTSTYS--PSEDHIIEQNVDLA 261
YE+ N F N PP AC+ TS Y E H I LA
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRDTLA 409
>SPAC328.10c |rps502|rps5-2|40S ribosomal protein
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 203
Score = 26.2 bits (55), Expect = 2.2
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = +1
Query: 34 FCADPLGRTAIERDRSNFKKAHTYPLCSRDYEITPNLLFKNQELVFRDPPSACAATPTST 213
F + L + + R+N KK + +EI L +N V D +AC ST
Sbjct: 66 FIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDST 125
Query: 214 YSPSEDHIIEQNVDLA 261
S + Q VD++
Sbjct: 126 RIGSAGTVRRQAVDVS 141
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 2.2
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 26 FLPFAPIHWAELR*NVIDRISKRHTPTLC--APVITKLLQISCSKIRS*CFVIPHPRVPQ 199
FL + H + ++ + +S T+C AP + L ++C+K+ C + PR
Sbjct: 525 FLIISSFHISAVKRSPFSSLSPVILLTICNIAPFVENLSFVTCAKLMQLCSSLSSPRFLF 584
Query: 200 LPPRHIHLV 226
PR+ HL+
Sbjct: 585 RNPRN-HLL 592
>SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 26.2 bits (55), Expect = 2.2
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = +1
Query: 34 FCADPLGRTAIERDRSNFKKAHTYPLCSRDYEITPNLLFKNQELVFRDPPSACAATPTST 213
F + L + + R+N KK + +EI L +N V D +AC ST
Sbjct: 66 FIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDST 125
Query: 214 YSPSEDHIIEQNVDLA 261
S + Q VD++
Sbjct: 126 RIGSAGTVRRQAVDVS 141
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 2.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 428 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 321
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.0 bits (52), Expect = 5.1
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +1
Query: 73 DRSNFKKAHTYPLCSRDYEITPNLLFKNQELVFRDPPSACAATPTSTY 216
D N K + + E TP +NQ L F P A PT+ +
Sbjct: 148 DHGNLKLDASPSFLKKPAEYTPLANRQNQNLAFDSPTEALPPKPTTPW 195
>SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 5.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 58 TAIERDRSNFKKAHTYPL 111
TAI R+ F K H+YP+
Sbjct: 16 TAIVRESDKFAKVHSYPM 33
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 5.1
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = -1
Query: 398 WSAAICLLTCCTWSSSLTRSMGATAVLETAAEIPPARKSLANATGSARSTFCSIM*SS 225
+S++I ++ SSS+ + + + + +++ P+ SL+ ++ S STF S SS
Sbjct: 553 FSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSS 610
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 24.6 bits (51), Expect = 6.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 136 PNLLFKNQELVFRDPPSACAATPT 207
P + K E + RDPP A PT
Sbjct: 4 PKRIIKEIETLTRDPPPGIVAAPT 27
>SPBC19G7.17 ||SPBC36B7.01|translocon subunit Sec61 homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 24.2 bits (50), Expect = 8.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 244 QNVDLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAAD 396
+ D DP+ + L G ++ + T +API LLQ+ K+IA +
Sbjct: 55 EKTDTLDPINNFR-VLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVN 104
>SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 522
Score = 24.2 bits (50), Expect = 8.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 398 WSAAICLLTCCTWSSSLTRSMGATAVLETAAEIPPA 291
WSA +CL+ C SL + E A I PA
Sbjct: 152 WSAMVCLMAACRNGPSLLGLRFLAGIFE--ASITPA 185
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,777,355
Number of Sequences: 5004
Number of extensions: 34206
Number of successful extensions: 124
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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