Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021264X
(437 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 59 2e-09
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 58 2e-09
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 54 7e-08
07_03_0117 + 13589997-13590998 48 2e-06
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 48 4e-06
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 46 1e-05
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 45 2e-05
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 42 3e-04
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 41 4e-04
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 41 5e-04
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 40 7e-04
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 40 0.001
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 38 0.003
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 38 0.003
04_04_0048 + 22351788-22352177,22353175-22353711 38 0.005
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 35 0.033
03_01_0534 + 3996479-3997458,3997938-3998265 35 0.033
10_07_0101 - 12872296-12873288 34 0.043
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 34 0.057
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 33 0.13
05_04_0010 - 17132810-17132935,17133017-17133169,17133202-171332... 31 0.53
01_01_0877 - 6878905-6879600,6880696-6880968 31 0.53
07_03_0318 - 16721615-16722154 29 2.2
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 29 2.2
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 28 2.9
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 28 2.9
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 28 2.9
03_05_0857 - 28288892-28288969,28289478-28289580,28289979-28290109 28 2.9
02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707 28 2.9
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 28 3.8
08_02_1577 + 27985066-27985434,27985520-27985594,27986159-279863... 27 5.0
06_03_1028 - 27004229-27004566,27005554-27005772,27006254-270063... 27 5.0
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 27 5.0
09_04_0521 - 18297343-18297840 27 8.7
05_01_0445 + 3547176-3547577,3548625-3549557,3550246-3550524,355... 27 8.7
04_04_0575 - 26342697-26342885,26343030-26343165,26343279-263437... 27 8.7
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 27 8.7
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 58.8 bits (136), Expect = 2e-09
Identities = 33/54 (61%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVR 432
F DFL GG+SAAVSKTA APIERVKLL+Q Q + K + YKGI D F R
Sbjct: 82 FMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGR 135
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 58.4 bits (135), Expect = 2e-09
Identities = 31/54 (57%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVR 432
F DF+ GG+SAAVSKTA APIER+KLL+Q Q + K YKGI D F R
Sbjct: 80 FMIDFMMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKSGRLSHPYKGIADCFGR 133
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 53.6 bits (123), Expect = 7e-08
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 AFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRI 435
A A DF GG +A V+KT AP+ERVKLLLQ Q + ++ + + Y+GI DAF R+
Sbjct: 23 AAAADFAMGGAAAVVAKTGAAPVERVKLLLQNQAEMLRRGSLTRPYRGIADAFGRV 78
>07_03_0117 + 13589997-13590998
Length = 333
Score = 48.4 bits (110), Expect = 2e-06
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +1
Query: 205 TSTYSPSEDHIIEQNVDLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQ 384
+S +PS ++ + AFA++ +AGG++ V+KTAVAP+ERV L+ QV +
Sbjct: 18 SSDAAPSPANLSRTATAICSTPAFAREMVAGGVAGVVAKTAVAPLERVNLMRQVGAAPRG 77
Query: 385 IAADQRYKGI 414
A Q + I
Sbjct: 78 AGAVQMLREI 87
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 47.6 bits (108), Expect = 4e-06
Identities = 19/32 (59%), Positives = 28/32 (87%)
Frame = +1
Query: 274 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 369
FAK+ +AGG++ A SKTA+AP+ER+K+LLQ +
Sbjct: 27 FAKEMIAGGVAGAFSKTAIAPLERLKILLQTR 58
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 46.0 bits (104), Expect = 1e-05
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +1
Query: 268 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQH 372
++ K AGG++ VS+TAVAP+ER+K+LLQVQ+
Sbjct: 41 LSICKSLFAGGVAGGVSRTAVAPLERMKILLQVQN 75
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = +1
Query: 274 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 369
+AK+ +AGG + A +KTAVAP+ERVK+LLQ +
Sbjct: 29 YAKELIAGGAAGAFAKTAVAPLERVKILLQTR 60
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +1
Query: 265 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 369
P+A ++ +AGG++ V+KTAVAP+ERVK+L Q +
Sbjct: 23 PLA-VRELVAGGVAGGVAKTAVAPLERVKILFQAR 56
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1
Query: 277 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 369
+K +AGG+S A S+TA AP++R+K+++QVQ
Sbjct: 234 SKYLIAGGVSGATSRTATAPLDRLKVIMQVQ 264
Score = 33.5 bits (73), Expect = 0.076
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +1
Query: 214 YSPSEDHIIEQNVDLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 363
Y +++I++ + + + +AGG++ AV++TA+ PI+ VK LQ
Sbjct: 308 YEMLKEYIMKSKGENKSDIGTSGRLMAGGLAGAVAQTAIYPIDLVKTRLQ 357
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 40.7 bits (91), Expect = 5e-04
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +1
Query: 256 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 369
++ V +K +AGGI+ A S+TA AP++R+K+++QVQ
Sbjct: 226 ISKSVNASKYLIAGGIAGAASRTATAPLDRLKVIMQVQ 263
Score = 33.5 bits (73), Expect = 0.076
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +1
Query: 214 YSPSEDHIIEQNVDLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 363
Y +++I++ + V ++ +AGG++ AV++TA+ P++ VK LQ
Sbjct: 307 YEMLKEYIMKSKGENKSEVGPSERLVAGGLAGAVAQTAIYPVDLVKTRLQ 356
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQ-IAADQRYKGIVDAFVR 432
F +D +AG T VAPIER KLLLQ Q + + +R++G D R
Sbjct: 48 FERDLVAGAAMGGAVHTVVAPIERAKLLLQTQDGNAALLGRARRFRGFADCVAR 101
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA 390
LAGG++ AVSKT AP+ R+ +L QVQ + +A
Sbjct: 41 LAGGVAGAVSKTCTAPLARLTILFQVQGMHSDVA 74
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 286 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGI 414
F AG + AV+KT AP++RVKLL+Q V ++ + KGI
Sbjct: 93 FAAGAAAGAVAKTITAPLDRVKLLMQTHSV--RVVGESTKKGI 133
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 292 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRY 405
AGG + AVSKT AP+ R+ +L QV + +AA ++Y
Sbjct: 14 AGGFAGAVSKTCTAPLARLTILFQVAGMHSDVAALKKY 51
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 435
LAGG+S V++ +P + +K+ +Q RY GI DAF +I
Sbjct: 120 LAGGVSGVVAQVVASPADLIKVRMQADSRLLSQGIQPRYTGIFDAFTKI 168
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 280 KDFLAGGISAAVSKTAVAPIERVKLLLQV 366
K ++GGI+ AVS+TAVAP+E ++ L V
Sbjct: 136 KRLISGGIAGAVSRTAVAPLETIRTHLMV 164
>03_01_0534 + 3996479-3997458,3997938-3998265
Length = 435
Score = 34.7 bits (76), Expect = 0.033
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 256 LADPVAFAKDFLAGGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR 432
+++P A A AGG+SAA++ V P++ + L V Q ++ RY+G VDAF +
Sbjct: 126 VSEPAATAAASAAGGVSAAIAAQVVWTPVDVISQRLMV-----QTSSTCRYRGGVDAFKK 180
Query: 433 I 435
I
Sbjct: 181 I 181
>10_07_0101 - 12872296-12873288
Length = 330
Score = 34.3 bits (75), Expect = 0.043
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 256 LADPVAFAKDFLAGGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR 432
+A+P A A AGG+SAAV+ V P++ V L VQ AA Y+G DA R
Sbjct: 131 VAEPAASAAASAAGGVSAAVAAQVVWTPVDVVSQRLMVQ----TAAAGPPYRGGADALRR 186
Query: 433 I 435
I
Sbjct: 187 I 187
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 33.9 bits (74), Expect = 0.057
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 196 ATPTSTYSPSEDHIIEQNVDL---ADPVAFAKDFLAGGISAAVSKTAVAPIERVKL 354
AT SE ++E+ + A + K +G ++A VS+T VAP+ER+KL
Sbjct: 98 ATEEEVAEASEGKVVEEVKEARAGAGAMNMTKHLWSGAVAAMVSRTVVAPLERLKL 153
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 283 DFLAGGISAAVSKTAVAPIERVKLLLQVQ 369
D LAG IS +S+T +P++ +K+ QVQ
Sbjct: 16 DALAGAISGGISRTVTSPLDVIKIRFQVQ 44
>05_04_0010 -
17132810-17132935,17133017-17133169,17133202-17133263,
17133384-17133435,17133794-17133883,17134075-17134170,
17134258-17134311,17134575-17134665,17134996-17135072,
17135770-17135852,17136057-17136111
Length = 312
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGI 414
+AGG + V +TA+ PI+ +K LQ QI Y G+
Sbjct: 22 IAGGTAGVVVETALYPIDTIKTRLQAARGGSQIQWKGLYSGL 63
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 238 IEQNVDLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIV 417
I+Q +++P ++ LAG + A+ ++P+E VK+ LQ++ ++ + G V
Sbjct: 106 IDQPSSMSEPPSYTSVALAGVGTGALQTLILSPVELVKIRLQLEAAGQKHRRPGDHHGPV 165
Query: 418 D 420
D
Sbjct: 166 D 166
>07_03_0318 - 16721615-16722154
Length = 179
Score = 28.7 bits (61), Expect = 2.2
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -1
Query: 365 TWSSSLTRSMGATAVLETAAEIPPARKSLANATGSARSTFCSIM*SSLGEYVEVGVAAHA 186
TW+SS T + ATAV T A P A AT + +T + + L EY G+ A A
Sbjct: 50 TWASSATSATAATAV--TGATAPMAAHGATAATAAPGATSVT---TGLHEYHAPGMVATA 104
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQV 366
++G ++ AVS+T VAP+E ++ L V
Sbjct: 141 VSGAVAGAVSRTCVAPLETIRTHLMV 166
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 280 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS 378
K LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 377 KSALAGGLASALSTSVMHPIDSMKTRVQASSLS 409
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 280 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS 378
K LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 386 KSALAGGLASALSTSVMHPIDSMKTRVQASSLS 418
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGI 414
+AGG + V +TA+ PI+ +K LQ +I Y G+
Sbjct: 21 IAGGAAGVVVETALYPIDTIKTRLQAAKGGSKIQWKGLYAGL 62
>03_05_0857 - 28288892-28288969,28289478-28289580,28289979-28290109
Length = 103
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +2
Query: 29 LPFAPIHWAELR*NVIDRISKR--HTPTLCAPVITK 130
LP P+ W+ I R K HT +C PV+TK
Sbjct: 34 LPGYPVGWSRWLVKPITRFRKNLVHTKIICLPVVTK 69
>02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707
Length = 251
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQV 366
++G I+ AVS+T VAP+E ++ L V
Sbjct: 132 VSGAIAGAVSRTFVAPLETIRTHLMV 157
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 163 LVFRDPPSACAATPTSTYSPSEDHIIEQNVDLADPVAFAKDFLAGGISAAVSK 321
++FR P A AA S + ++ ++ A P K+ GGIS+++SK
Sbjct: 87 VLFRSVPEARAALDALQGSKVKGSVVR--LEFARPARAVKNLWVGGISSSISK 137
>08_02_1577 +
27985066-27985434,27985520-27985594,27986159-27986320,
27986415-27986590,27986681-27986756,27987154-27987282,
27987363-27987482,27987734-27987815,27988016-27988110,
27988427-27988491,27988604-27988802,27989426-27989620,
27989866-27989960,27990059-27990194,27990265-27990482,
27990729-27990856,27991148-27991617
Length = 929
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +1
Query: 49 LGRTAIERDRSNFKKAHTYPLCSRDYEITPNLLFKNQELVFRDPPSACAATPTSTYSPSE 228
L +E+D +N + +C + + + E V DP +ACA T E
Sbjct: 56 LYNNVLEKDEANVEALIGKGICLQAQSLPMQAIECFNEAVRIDPGNACALTYCGMIYKDE 115
Query: 229 DHIIE 243
H++E
Sbjct: 116 GHLVE 120
>06_03_1028 -
27004229-27004566,27005554-27005772,27006254-27006390,
27007172-27007509
Length = 343
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 76 DHVLSQFCPVDRRKRKEGADVANI 5
D LSQ + +R RK GAD ANI
Sbjct: 188 DLQLSQVMDISKRSRKAGADSANI 211
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 151 KNQELVFRDPPSACAATPTSTYSPSEDHIIEQN 249
K + + F DP C T T +P DH+ +N
Sbjct: 604 KKEPIGFLDPTQICQTQHTVTLAPGSDHLKGKN 636
>09_04_0521 - 18297343-18297840
Length = 165
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 342 ACQAAAPSTARQQADRRRPALQGYRRC 422
A AA PS A R RPA G+RRC
Sbjct: 69 AAAAAGPSLADTFRARFRPARFGHRRC 95
>05_01_0445 +
3547176-3547577,3548625-3549557,3550246-3550524,
3550624-3550752,3550813-3550869
Length = 599
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 179 PHPRVPQLPPRHIHLVKI 232
PHPR P L PR +H +++
Sbjct: 23 PHPRRPGLRPRRLHRLRL 40
>04_04_0575 -
26342697-26342885,26343030-26343165,26343279-26343795,
26344286-26344381,26344933-26345011,26345329-26345712
Length = 466
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 268 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAAD 396
V++++ LAG + AV P E +KL QV V A D
Sbjct: 194 VSYSEAMLAGIAAGAVESVLCTPFELLKLRSQVGSVKPMKATD 236
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 393
+AGG + +S T + P++ +K LQV + +++
Sbjct: 22 IAGGSAGVISATVLCPLDVIKTRLQVYGLPSNLSS 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,812,017
Number of Sequences: 37544
Number of extensions: 264206
Number of successful extensions: 880
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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