Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021264X
(437 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 49 2e-06
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 33 0.078
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.18
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.18
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 0.31
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 0.96
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 29 1.7
SB_20830| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 5.1
SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 27 5.1
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 5.1
SB_53105| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-11) 27 6.8
SB_40174| Best HMM Match : Copine (HMM E-Value=5.5e-20) 27 6.8
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 6.8
SB_49314| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-30) 27 8.9
SB_36623| Best HMM Match : NACHT (HMM E-Value=0.26) 27 8.9
SB_32391| Best HMM Match : rve (HMM E-Value=4.9e-14) 27 8.9
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 27 8.9
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 27 8.9
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 27 8.9
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 27 8.9
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 27 8.9
SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 27 8.9
SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 27 8.9
SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_1533| Best HMM Match : RVT_1 (HMM E-Value=0.0074) 27 8.9
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVR 432
F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD +R
Sbjct: 10 FVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMR 63
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +1
Query: 280 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 435
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQI 81
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVR 432
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSR 62
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +1
Query: 295 GGISAAVSKTAVAPIERVKLLLQVQ 369
GG A VS+TA AP++R+K+LLQVQ
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ 167
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 33.5 bits (73), Expect = 0.078
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 187 ACAATPTSTYSPSEDHIIEQNVDLADP---VAFAKDFLAGGISAAVSKTAVAPIERVKLL 357
A T S YS S I + + L+DP + + AG AP ERVK L
Sbjct: 132 AAPVTAVSFYSLS----IGKRLQLSDPNKEPTMVQYYNAGVFCGVCVSFIYAPTERVKCL 187
Query: 358 LQVQHVSKQIAADQRYKGIVDAFVRI 435
LQVQ K+ RY+G+ D +++
Sbjct: 188 LQVQ---KESGTKARYQGLGDCLLQV 210
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 268 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQV 366
+ + + FL GG SA ++++ +P+E VK+L QV
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV 88
Score = 31.1 bits (67), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 289 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 435
LAG S ++ V P E +K L VQHV+K ++ YKG+ A I
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTI 202
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 32.3 bits (70), Expect = 0.18
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 262 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 393
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMAS 53
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.5 bits (68), Expect = 0.31
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 298 GISAAVSKTAVAPIERVKLLLQVQH 372
G+S +KT AP+ER+K+L Q Q+
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN 87
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 30.7 bits (66), Expect = 0.55
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +1
Query: 265 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAF 426
P + G +S +SK + P + +K +QVQ + Q+Y G+ D F
Sbjct: 26 PADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCF 82
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 0.96
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 292 AGGISAAVSKTAVAPIERVKLLLQ 363
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 301 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 435
I A TAV PI+ VK +Q Q + A++ YK +D F ++
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRA--VLEAEKVYKNSIDCFFKV 964
>SB_20830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 163 LVFRDPPSACAATPTSTYSPSEDHIIEQNVDLAD 264
LV D AC A + ++PSE I ++N L D
Sbjct: 98 LVITDLSDACRAPASRHFTPSEKQIFKENSKLCD 131
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 244 QNVDLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQV 366
Q D + + K FL GG++ A S P++ VK +Q+
Sbjct: 225 QGGDSSKDIGAVKTFLIGGVAGAASVFGNTPVDVVKTRMQL 265
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 130 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 240
+TPN LL + + R+P SA S YSPSE I+
Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003
>SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +1
Query: 178 PPSACAATPTSTYSPSEDHIIEQNVDLADPV---AFAKDFLAGGI 303
PP A A PT Y P ++I + + +A V + K+ L G+
Sbjct: 947 PPPATALCPTPCYGPYSPYLIAEYIHVAQGVHLPSHVKEVLTDGV 991
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +1
Query: 244 QNVDLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 423
++VD P+ F +GGI+ +S P++ VK Q + +Y G D
Sbjct: 350 EHVDNLSPIRL---FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADC 406
Query: 424 FVRI 435
+I
Sbjct: 407 VKKI 410
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 109 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 231
LC +D E++P LLF N +++ R P A P++ S ED
Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96
>SB_53105| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-11)
Length = 376
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 21 APSFLLRRSTGQNCDRT*SIEFQKGTH 101
+PS LRR+T NC S F+K H
Sbjct: 318 SPSHYLRRNTFSNCSMPPSAHFEKRRH 344
>SB_40174| Best HMM Match : Copine (HMM E-Value=5.5e-20)
Length = 723
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +1
Query: 73 DRSNFKKAHTYPLCSRDYEITPNL-----LFKNQELVFRDPPSACAATPTSTYSPSEDHI 237
D S ++AH YP+ + E + L F+ Q + FRD C TS ++D +
Sbjct: 638 DNSQIRRAHEYPIRKQQIEASARLRTGFVTFQIQFVPFRDYLDKCYGDITSGARLAKDVL 697
Query: 238 IEQNVDLAD 264
E L D
Sbjct: 698 EELPDQLTD 706
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +1
Query: 91 KAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 225
++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 109 ESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_49314| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-30)
Length = 300
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 95 HTPTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHIHLVKIT 235
H C PV+ L K + ++ H RV PPR +H++ +T
Sbjct: 256 HVNACCNPVVYSLHNPKLRKCMN--RLVHHKRVRTSPPRAVHVLAMT 300
>SB_36623| Best HMM Match : NACHT (HMM E-Value=0.26)
Length = 420
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 76 RSNFKKAHTYPLCSRDYEITPNLLFKNQELVFRDPPSACAATPTSTYSPS 225
RSN ++ L S D ++ P++LF+ E+ R P C AT +T P+
Sbjct: 45 RSNISQSEDLDLRSTDGKMAPHILFR--EIWSRKP--LCEATVITTTRPT 90
>SB_32391| Best HMM Match : rve (HMM E-Value=4.9e-14)
Length = 569
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 176 IPHPRVPQLPPRHIHLVKIT*SNKMST 256
+P+PR+P+L ++ L ++T S++ ST
Sbjct: 41 LPNPRIPELKKKYNKLRRLTFSDETST 67
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 280 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 369
+ FLAGG ++ V +T P++ + L +Q
Sbjct: 107 RGFLAGGCASIVGQTITVPVDIISQKLMIQ 136
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 176 IPHPRVPQLPPRHIHLVKIT*SNKMST 256
+P+PR+P+L ++ L ++T S++ ST
Sbjct: 457 LPNPRIPELKKKYNKLRRLTFSDETST 483
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 316 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 426
S+ VA ER +L+ Q Q +D RY+G +D+F
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSF 314
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 26.6 bits (56), Expect = 8.9
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 289 LAGGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 435
LA G+ A V+ + V P++RVK +LQ++ + Y G VD RI
Sbjct: 141 LAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRI 186
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 286 FLAGGISAAVSKTAVAPIERVKLLLQV 366
F+ GG++ AVS+T P++ V+ +Q+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQL 202
>SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1019
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 176 IPHPRVPQLPPRHIHLVKIT*SNKMST 256
+P+PR+P+L ++ L ++T S++ ST
Sbjct: 144 LPNPRIPELKKKYNKLRRLTFSDETST 170
>SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1358
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 176 IPHPRVPQLPPRHIHLVKIT*SNKMST 256
+P+PR+P+L ++ L ++T S++ ST
Sbjct: 161 LPNPRIPELKKKYNKLRRLTFSDETST 187
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 176 IPHPRVPQLPPRHIHLVKIT*SNKMST 256
+P+PR+P+L ++ L ++T S++ ST
Sbjct: 351 LPNPRIPELKKKYNKLRRLTFSDETST 377
>SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 43 DPLGRTAIERDRSNFKKAHTYPLCSRDYEITPNLLFKNQELVFRDPPSACAAT 201
DP+GR +E K L + ITP + QE+ R P + +++
Sbjct: 208 DPMGRATVELSELEVGKPIEMELDLEVFTITPKNIEDRQEMTRRTPKRSASSS 260
>SB_1533| Best HMM Match : RVT_1 (HMM E-Value=0.0074)
Length = 503
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 176 IPHPRVPQLPPRHIHLVKIT*SNKMST 256
+P+PR+P+L ++ L ++T S++ ST
Sbjct: 41 LPNPRIPELKKKYNKLRRLTFSDETST 67
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,127,036
Number of Sequences: 59808
Number of extensions: 285389
Number of successful extensions: 1275
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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