Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021264X
         (437 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   107   5e-26
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   107   5e-26
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   5.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   7.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   7.9  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  107 bits (257), Expect = 5e-26
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = +1

Query: 256 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 435
           LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRI
Sbjct: 4   LADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRI 63


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  107 bits (257), Expect = 5e-26
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = +1

Query: 256 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 435
           LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRI
Sbjct: 4   LADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRI 63


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 241 EQNVDLADPVAFAKDFLAGGI 303
           ++N+D+ D  A   DF+A GI
Sbjct: 312 QKNLDIRDKKAAIVDFIAAGI 332


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 173 VIPHPRVPQLPPRHIHLVKIT 235
           +I  P   +LPP H H   +T
Sbjct: 92  IITIPPTRKLPPLHPHTAMVT 112


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 2   RYVGNICPFLPFAPIHWAELR*NVIDRISKRH 97
           RY+G   PF  F P +   LR  +  R    H
Sbjct: 157 RYIGPSTPFPRFIPPNAYRLRPPLNPRFGSTH 188


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 2   RYVGNICPFLPFAPIHWAELR*NVIDRISKRH 97
           RY+G   PF  F P +   LR  +  R    H
Sbjct: 157 RYIGPSTPFPRFIPPNAYRLRPPLNPRFGSTH 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,904
Number of Sequences: 438
Number of extensions: 2431
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)