Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021261
         (705 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    25   2.3  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           24   5.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.1  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        23   9.4  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    23   9.4  

>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -3

Query: 100 GVSLLYLSFLHEIIIDRH--YSCCATMFRF 17
           G+ L +L+F H I +D H     C  M RF
Sbjct: 6   GLLLTFLTFAHSITVDEHGYIMYCPCMGRF 35


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
 Frame = +3

Query: 435 SDHVTAERGHYGCSHGRRADEVIAEIHEKLSETR-RNQQ----TASAITTLHGRLPTARR 599
           +DHV    G     HGR   ++I + ++ ++  R RN +    T + I    GR   A R
Sbjct: 268 ADHVLVNVGTVDLLHGRAMIDLIHDFNQLVARFRERNVEPIMTTLTPIANSGGRTTMAER 327

Query: 600 L 602
           L
Sbjct: 328 L 328


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 62   YFMQEGEVEERDPTTGKTIKKPTLKYEFDK 151
            Y +   +V +   TTGK + +P     FDK
Sbjct: 2925 YHVSRNDVTQHAITTGKVVGRPESTLIFDK 2954


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 286  RQNGFQVYVCTMELDPQVCYKRNIHNRTLEDIEIICTRFFP 408
            R  G Q+ + TM+L   +   RN+  RT+ +  + CTR  P
Sbjct: 1362 RHAGAQLMINTMQLRFWIVGARNVAKRTVFNC-VKCTRCRP 1401


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 516 EKLSETRRNQQTASAITTLHGRLPTARR 599
           EKL  T  N Q A + TT++    TAR+
Sbjct: 98  EKLLRTSLNLQWADSKTTVYEAYDTARK 125


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = +1

Query: 253 PRHYADIWNFARQNGFQVYVCTMELDPQVCYKRNIHNRTLEDIEII 390
           P H  +I   A + G+ +   T+++DP  C K  ++   L+   ++
Sbjct: 163 PIHRFEIPKEAVETGYGLTSITLDVDPSDCEKVFVYISDLQTYRMV 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,849
Number of Sequences: 2352
Number of extensions: 14178
Number of successful extensions: 72
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)